Xiphophorus hellerii (green swordtail): 116712219
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Entry
116712219 CDS
T07363
Symbol
mrc1
Name
(RefSeq) macrophage mannose receptor 1 isoform X1
KO
K06560
mannose receptor, C type
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116712219 (mrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116712219 (mrc1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116712219 (mrc1)
04090 CD molecules [BR:
xhe04090
]
116712219 (mrc1)
04091 Lectins [BR:
xhe04091
]
116712219 (mrc1)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Phagocytosis
C-lectin receptors
116712219 (mrc1)
Pattern recognition receptors [BR:
xhe04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
116712219 (mrc1)
CD molecules [BR:
xhe04090
]
Proteins
116712219 (mrc1)
Lectins [BR:
xhe04091
]
C-Type lectins
Group 6: Mannose receptor family
116712219 (mrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
UL45
Chordopox_A33R
Xlink
Ricin_B_lectin
PARM
Flp1_like
Motif
Other DBs
NCBI-GeneID:
116712219
NCBI-ProteinID:
XP_032407990
LinkDB
All DBs
Position
21:complement(17024017..17036649)
Genome browser
AA seq
1439 aa
AA seq
DB search
MSPLSTFALTLCLLKALHIKADIDSGIFLIFNQGHNKCIKVESASFITLAQCNPRATEQQ
FLWVSESRLLSLSLKLCLGATEIKDLAKVLLFECDENNNLQHWQCKNETLFGLKDQDLYL
NWGNFKEKNVIIYKGAGTWSRWRIFGTLGDLCSKGFQETITIRGNAFGAPCQFPFKFASK
WYAECTTDGRTDGQLWCATEKDYDTQRKFGFCPNKGSFGWDTDPVTRVQYQRNTQATLTW
HQARMSCQQQGADLLSIVELHEQSYISGLTNHLGASLWIGLNSLDYESGWQWSNGNPFRY
LNWAPGHPSSVPGDSCATLNTRKASKWESSACSKKLGYICGKGNSTSLPPPPDKGPSFCP
SHWVPYGGQCYYLERSKKTWRDALAACHKEEADLASISNIEEQSFIITQSEYLQTDVLWI
GLNDQRNPMLFEWSDHSHVTFTNWQSDEPSHATNHQEDCVLIRGKDGKWADHMCEKTYGY
ICKKKASTKPTGGTQEEVNTGCKLGTTRFGSFCYEIGRETKTFAEAMQACSKGGSNLVDI
ADRYENAFLVSLVGLRPEKYFWTGMSNTEDRNIFKWTTRRKVTFTHFNVGMPDRKQGCVA
MTTGTFAGLWDVISCSNKEKYICKKKADGVLATTVQPTTPPLTCASGWTPVAKRNVCYKV
YKKMKENKKTWQEAEDFCKAIGGNLISILSIRDLDNMNIYSTDAVWIGLRLMGPNQGFVW
SDGSPFSFENWGYGEPNNHNDNEQCAEAQFYYGRHWNDRNCDFYNNWICQIPKGVTPKPE
PVFIVEVFNTTEDGWLIYNDSHYYINKNKLSMEAARDYCKKNFGELAVITAESERKFLWK
QLSRGSEAQQNTQYYIGLVVNLDHSFSWVDGTPVTYTAWENNEPNFANNDENCVTMYTSM
GYWNDINCGVDLPSICKRRDSFINTTMAPTTPPKGGCAPEWLTFKGKCYKFFADKKNWKD
ARTHCQKEGGNLVSITSEKEQAFLTTQMLSQKEDLWLGMNDINWEMNFVWTDGRAILFTN
WAKGHPTSTPDGRYFLDEAFDCVIMVGSTLKIKGQWKVEDCGEKRDFVCKKNVDSQIAVP
ATTVSPKSFYKIGNDSYKLVAQKMRWDEARRQCQADDSELASILNPMIQAFVTLQISTLK
EPVWIGLNNNVTGGRFKWVDNWLLSYTKWGKNEPKNHGCVYIDVDNTWKTTECSSTYYSI
CKRSPDLAPTEPPQLPGNCPEPKKDRSWIPFRGHCYYFLASVAENWAHASVECIKLGASL
VSIQDPIEAEFIQKNIESLQDEAKTFWIGLCKSRDNEWMWIDNSVVDYTNWKIGMPKSDS
CVNIHSDSGEWSTNSCSRYRSYICKRPKAIPPTSRPQFVVQTVKKASSHGSAGITVAIVL
IVIAIVGLVAFLLFRKRIRLPMTTLAECTFDNKLYFNNPNRVPVDTKGLVVNIEQNEQA
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctttgtcaacatttgctctgactctttgtctcctgaaagccctccacatcaaa
gctgacattgacagtggtatttttctgatcttcaaccagggccacaacaagtgcataaag
gtagaaagcgccagtttcataacattggcacagtgcaatccccgtgccacagagcagcag
tttctctgggtctcagagtctcgccttctaagtctttccctcaagctgtgtcttggagcc
acggaaattaaagacttggcaaaggtgcttctttttgagtgcgacgagaataacaatctt
cagcactggcaatgtaagaatgagaccctctttggtttgaaagaccaagatctgtacctt
aattggggcaacttcaaagagaagaatgtaataatctacaaaggcgcagggacgtggagt
cgctggaggatatttggcactctgggggatctttgctcaaaggggtttcaagagaccatt
accataagaggcaatgcgtttggagccccctgtcagtttccattcaagtttgcttcgaaa
tggtacgctgaatgcacaacagatggacgcacagacgggcagctgtggtgtgccactgag
aaggattacgacacacaaaggaagtttgggttttgtccaaataaaggatcttttggttgg
gacactgacccagtcaccagggttcagtatcagaggaatacacaggcgactctgacatgg
caccaggccaggatgagctgccagcagcagggagcagatctcctcagcatcgtagagctg
cacgaacagtcatacatttcagggttaacaaatcatttgggagcatctctgtggattgga
ctaaacagcttggactatgagagtggatggcagtggagcaatggaaacccattcagatat
ctaaattgggccccaggtcatccatcttcagtccctggggacagctgtgcaactctaaat
acaagaaaagcatcaaaatgggaaagcagtgcttgcagcaaaaaacttggctatatttgc
ggtaaaggaaactctaccagtctgcctccaccaccagataaagggcccagcttctgcccg
agtcactgggtgccctatggaggacaatgttattacctggagaggagtaaaaagacgtgg
agggacgctttggcagcatgtcacaaagaggaagcagatttggccagcataagcaacata
gaagagcagagcttcattataacacagtcagaatatttacagacagatgtgctctggatt
gggctgaatgatcagaggaacccgatgttgtttgaatggtctgatcactctcatgtgacc
ttcaccaactggcagagtgatgaaccatctcatgctaccaaccaccaggaggactgtgtc
ttgatccgaggaaaggatggaaagtgggcagatcacatgtgtgagaagacatatggatat
atttgtaagaagaaagcttccacaaaaccgactggaggtacccaagaggaagtcaataca
ggatgcaagcttggcaccactagatttggttccttttgctatgagattggacgtgaaaca
aaaacgtttgcagaggcaatgcaggcatgctcaaaagggggttcaaaccttgtagacatt
gctgacagatatgagaatgcttttctcgtcagtttagtgggactgagaccagaaaagtat
ttttggacggggatgtccaacacagaggacaggaatattttcaagtggacaacaagaaga
aaggttacctttactcatttcaatgttggcatgccagacagaaaacaggggtgtgttgcc
atgacaactgggacttttgctggtttatgggatgttatcagctgcagcaacaaagagaag
tatatttgcaaaaagaaggcagacggtgtgcttgcgacaaccgtccaaccgaccacccca
ccactgacctgtgcctctggttggactcctgttgctaaaaggaatgtctgctataaagtt
tacaagaaaatgaaggagaataaaaagacttggcaggaagcagaggacttctgcaaagcc
attggtggaaacctgatcagcatactgagtattagggacttagacaatatgaatatttac
agtactgatgcagtctggataggcctgagactcatgggtcccaatcaaggttttgtctgg
agtgatggatcacctttcagttttgagaactggggctatggagaaccaaacaaccacaat
gacaacgaacagtgtgcagaagctcagttttactatggacgtcactggaacgatcggaac
tgtgacttctataacaattggatctgccagatacccaaaggggtgactcccaaacctgag
ccagtcttcattgtagaagtattcaacaccacagaagatgggtggctcatatataatgac
agtcattactacataaacaaaaacaagttatcaatggaagctgcaagagattactgtaaa
aagaactttggtgaacttgcagtcataacagcagaaagtgaaaggaagttcctctggaaa
caattatcaaggggctctgaagctcaacaaaatacacaatactacattggtttggttgtg
aacttggatcattccttcagctgggtagacggaacaccagtaacttacactgcatgggaa
aacaatgagccaaactttgcaaataatgatgaaaattgcgtaacaatgtacacaagcatg
ggttattggaatgatatcaactgtggtgtggacctaccttcaatttgcaaaagaagagac
agttttattaatacaacaatggcacccactacccctcctaaagggggatgtgcacctgag
tggcttacttttaaaggaaagtgttacaaattctttgcggataagaagaactggaaagat
gccagaacccactgccagaaagagggaggaaatcttgtgtctatcaccagtgagaaagag
caagcattcctaacaacacaaatgctgagccaaaaggaggatctgtggctaggcatgaat
gacatcaattgggaaatgaattttgtgtggacagatggcagagccattttattcaccaac
tgggccaagggacaccccacatcaacacctgatggacgctactttctggatgaggcgttt
gactgtgtgatcatggttggcagcaccctcaaaataaaaggacagtggaaagtggaagac
tgtggtgaaaaacgtgactttgtctgtaaaaagaatgttgattcccagattgcggtgcca
gccaccactgtttcaccaaagtccttttacaagattggcaatgactcctacaaactggtg
gcccagaagatgagatgggatgaggctcggagacaatgccaggcagacgattcagagctg
gccagtatcctgaaccctatgatccaggctttcgtcaccttgcagatttccacactcaaa
gagccagtttggatcggcctcaacaacaatgtgaccggaggtcgctttaagtgggtcgat
aactggcttctctcttacaccaaatggggcaagaatgagccaaaaaaccatggttgtgtg
tatatagatgttgataacacatggaagacaacagaatgctccagtacttactattcaatc
tgcaaaaggtcaccagacttggctccgactgaaccgccacagcttcctggcaactgtcca
gagccaaagaaggacagatcctggataccttttaggggtcactgttattattttctggcc
tcggtggctgaaaactgggctcatgcctcagttgaatgtataaaactaggtgcttctcta
gtgagcattcaggaccccattgaggcagaattcatacagaagaatattgaaagcctgcaa
gatgaagccaaaactttctggattggtctctgcaagtcccgtgacaatgagtggatgtgg
atcgataacagtgttgtagactataccaactggaaaataggaatgccaaagtccgactca
tgtgtgaatatccattctgacagcggagagtggagcacaaacagctgcagcagatacagg
tcttacatctgtaaaaggcctaaagccattccacctacatcaaggcctcagtttgtagtt
caaactgttaaaaaagcatcatcacatggctctgctggcatcacagtggctattgtgctg
attgtcatagccatagtcggactcgttgcctttctcctgtttcgcaaacggatacggtta
cccatgacgaccctggccgagtgcacttttgacaacaagctgtacttcaacaatccaaat
cgagtgcctgtggatactaaaggcctggtggtcaacatagagcagaacgaacaagcatga
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integrated database retrieval system
