Xiphophorus hellerii (green swordtail): 116712770
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Entry
116712770 CDS
T07363
Symbol
pcgf5
Name
(RefSeq) polycomb group RING finger protein 5
KO
K11489
polycomb group RING finger protein 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116712770 (pcgf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116712770 (pcgf5)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
116712770 (pcgf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-Nse
zf-RING_10
zf-rbx1
zf-RING_6
zf-C3HC4_3
TRAF3_RING
Actin_micro
DUF1272
Prok-RING_4
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
116712770
NCBI-ProteinID:
XP_032408495
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Position
22:complement(2147049..2157292)
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AA seq
240 aa
AA seq
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MAATGRKHLVKDFNHFITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEESNDCPKCGIQ
VHETNPLEMLRLDNTLEEIIFKLVPGLREKEEQQELDFWKKNQPKENGQESLRCLPDGGA
SGCADDDGEGGEDGDYHRSDPQIAICLDCLHNAGQSGESSVTDLMKRFIRCSSRVTVGTI
KKFLSLKLKLPSSYELDVLCNGEIMGRDHTLEFIYMTRWRLHGENTYPMVLEYRPRIDFG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccgccacgggacggaagcacttggtaaaagatttcaaccatttcatcacctgctac
ctgtgccgaggttacctgatcaaaccgaccacagtcactgagtgcctgcacaccttctgt
aagagctgcatcgtgcagcactttgaggagagcaatgactgtcctaaatgtggcatccag
gtccatgagaccaacccactggagatgctgaggctggacaacaccctggaggagatcatc
ttcaagctggtgcccggactcagagaaaaagaggaacagcaggaactggacttctggaag
aagaaccagccgaaggagaacggccaagagagcctgcggtgtcttcctgacggcggcgcc
tctggctgcgccgatgacgatggtgagggcggtgaagatggagactaccacaggagcgac
cctcagatcgccatctgcctggactgcctgcacaacgcggggcagtccggggagagcagc
gtgacggacctgatgaagaggttcatccgctgctccagcagggttaccgtgggaaccatc
aagaagttcctcagtcttaaactcaagctgccgagctcttatgagctggatgtgctctgc
aacggagaaatcatgggcagagatcacaccctggagttcatctacatgacccggtggcgg
ctgcacggagagaacacgtatccgatggttctggagtaccggccgcggatcgacttcggc
tga
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