Xiphophorus hellerii (green swordtail): 116714656
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Entry
116714656 CDS
T07363
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116714656 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116714656 (pitx2)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116714656 (pitx2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
AATF-Che1
Auxin_canalis
DUF4524
ALMT
Motif
Other DBs
NCBI-GeneID:
116714656
NCBI-ProteinID:
XP_032411226
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Position
23:2066855..2123766
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AA seq
312 aa
AA seq
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MSSMRDPLNIDHHLTGNKLASTHHTALAMASSLQPLQRSVDSKHRLEVHTVSDTSSPESV
EKEKIQNKNDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTN
LTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNWAAKG
LTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMTSSMVPSAVTGVPGSSLNSLNNL
NNLSNPSLNSGVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYAGVQNPATN
LSACQYAVDRPV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagctctatgagggatccattaaatatagaccaccacctcacagggaataaactcgcc
tccacgcaccacacggctctggcgatggcgtccagcctgcagccgctgcagcgctccgtg
gactctaagcaccggttagaggtgcacactgtgtcggacacatcgagcccggagtctgtg
gaaaaagaaaaaatacaaaataaaaacgacgattcctcggacgacccgtccaagaagaag
aggcagcggcggcagaggactcacttcaccagccagcagctgcaggagctggaggccacc
ttccagaggaaccgctacccggacatgagcaccagggaggagatagccgtgtggaccaac
ctcacagaggccagagtcagggtttggttcaagaacagacgagccaagtggaggaaacgg
gagagaaaccagcaagcagagttgtgtaagaacggcttcggcccgcagttcaatggactc
atgcagccgtacgacgacatgtatcccagctacacgtacaacaactgggccgccaagggc
ctcacgtccgcctccttatccaccaaaagcttccccttcttcaactccatgaacgtcaac
cctttatcctcgcagaccatgttctcgccgcccaactccatctcctccatgacctccagc
atggtgccatccgctgtgaccggcgtgccaggatccagcctgaacagcctcaataacttg
aacaacctcagtaacccttccctcaactctggggtgcccacgccggcgtgcccctacgcg
ccgccgacccctccctacgtgtacagagacacttgtaactccagcctggccagcctgaga
ctgaaagccaagcagcactcgagttttggatacgccggggttcagaatccagccaccaat
ctgagcgcttgccagtacgcggtggacaggccggtctaa
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