KEGG   Xiphophorus hellerii (green swordtail): 116714656
Entry
116714656         CDS       T07363                                 
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
  KO
K04686  paired-like homeodomain transcription factor 2
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    116714656 (pitx2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xhe03000]
    116714656 (pitx2)
Transcription factors [BR:xhe03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    116714656 (pitx2)
SSDB
Motif
Pfam: Homeodomain OAR Homeobox_KN AATF-Che1 Auxin_canalis DUF4524 ALMT
Other DBs
NCBI-GeneID: 116714656
NCBI-ProteinID: XP_032411226
LinkDB
Position
23:2066855..2123766
AA seq 312 aa
MSSMRDPLNIDHHLTGNKLASTHHTALAMASSLQPLQRSVDSKHRLEVHTVSDTSSPESV
EKEKIQNKNDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTN
LTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNWAAKG
LTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMTSSMVPSAVTGVPGSSLNSLNNL
NNLSNPSLNSGVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYAGVQNPATN
LSACQYAVDRPV
NT seq 939 nt   +upstreamnt  +downstreamnt
atgagctctatgagggatccattaaatatagaccaccacctcacagggaataaactcgcc
tccacgcaccacacggctctggcgatggcgtccagcctgcagccgctgcagcgctccgtg
gactctaagcaccggttagaggtgcacactgtgtcggacacatcgagcccggagtctgtg
gaaaaagaaaaaatacaaaataaaaacgacgattcctcggacgacccgtccaagaagaag
aggcagcggcggcagaggactcacttcaccagccagcagctgcaggagctggaggccacc
ttccagaggaaccgctacccggacatgagcaccagggaggagatagccgtgtggaccaac
ctcacagaggccagagtcagggtttggttcaagaacagacgagccaagtggaggaaacgg
gagagaaaccagcaagcagagttgtgtaagaacggcttcggcccgcagttcaatggactc
atgcagccgtacgacgacatgtatcccagctacacgtacaacaactgggccgccaagggc
ctcacgtccgcctccttatccaccaaaagcttccccttcttcaactccatgaacgtcaac
cctttatcctcgcagaccatgttctcgccgcccaactccatctcctccatgacctccagc
atggtgccatccgctgtgaccggcgtgccaggatccagcctgaacagcctcaataacttg
aacaacctcagtaacccttccctcaactctggggtgcccacgccggcgtgcccctacgcg
ccgccgacccctccctacgtgtacagagacacttgtaactccagcctggccagcctgaga
ctgaaagccaagcagcactcgagttttggatacgccggggttcagaatccagccaccaat
ctgagcgcttgccagtacgcggtggacaggccggtctaa

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