Xiphophorus hellerii (green swordtail): 116716283
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Entry
116716283 CDS
T07363
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116716283
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116716283
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-RING_10
zf-RING_11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
116716283
NCBI-ProteinID:
XP_032413094
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Position
24:complement(568174..569786)
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AA seq
332 aa
AA seq
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MEQQAVQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCITNFWDEGEKKKSYHCPQCRQT
FTQRPVLQKNTMLAALLEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAVKSCLACP
ASYCEKHLQPHYDSIPLKKHKLVEPSKNLQENICSKHDEVMKMFCQTDRKCICYLCPVDD
HKGHNTVSAAAERTERQNELQGRRSIIQQMIQGKDTDVKLLQQETKAINRSADKTVENCE
KIFTQLICLLQKRSSDVKQLLSETSHISIIKVRPLRHFEDVTAAVTKLRDKLQDILKDSW
TNISLLVQFPPELECTWIAEQDFCTSTVSLKP
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaggcagttcagctggacagagaaactttctcctgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgtatgaactgtattaca
aacttctgggatgaaggtgagaaaaagaaaagctaccactgtcctcagtgcagacagacc
ttcacacagaggcctgtcctgcagaagaacaccatgctagcagctttactggaacagctg
aagaagactggacttcaagctgctcctgctgaccactgttatgctggacctgaagatgtg
gcctgtgatgtctgtactgggagaaaactgaaagccgtcaagtcctgtttagcctgtccg
gcctcttactgtgagaaacaccttcagcctcattatgattcaattcctttaaagaaacac
aagctggtggagccgtccaagaaccttcaggagaacatttgctctaagcatgatgaggtg
atgaagatgttctgtcaaacggatcggaagtgtatctgttatctctgccctgtggatgat
cataaaggccacaacacagtatcagctgcagcagaaaggactgagagacagaacgagcta
caggggagacgaagtatcatccagcagatgatccaaggcaaggatacagatgtaaaactg
cttcaacaggagacgaaggccatcaatcgctctgctgataaaacagtggagaactgtgag
aagatcttcacccagctgatctgtctcctccagaaaagaagctctgatgtgaagcagcta
ctgagtgagactagccatatatccatcatcaaggttcgtcctctgagacactttgaggat
gtgacagcagctgtgacaaagctccgagataaactacaggacatcctgaaggactcatgg
acaaacatctccctgttggtccagtttcctccagagttggagtgtacctggatcgcggag
caggacttctgcacttctacagtgtctctgaaaccatga
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integrated database retrieval system
