Xiphophorus hellerii (green swordtail): 116717008
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Entry
116717008 CDS
T07363
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116717008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116717008
04147 Exosome [BR:
xhe04147
]
116717008
04090 CD molecules [BR:
xhe04090
]
116717008
Enzymes [BR:
xhe01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
116717008
Transporters [BR:
xhe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116717008
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116717008
CD molecules [BR:
xhe04090
]
Proteins
116717008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
AAA_16
Rad17
RsgA_GTPase
AAA_30
AAA_5
G-alpha
AAA_29
AAA_15
DUF2207_C
Dak1
Motif
Other DBs
NCBI-GeneID:
116717008
NCBI-ProteinID:
XP_032413954
LinkDB
All DBs
Position
3:16207750..16225582
Genome browser
AA seq
1292 aa
AA seq
DB search
MGKESEMEMKSEVKHFQNGSLGEKEENDEKKSKKKKKKEKEPKEPMVGPLSVFRFADRWD
ILMIFVGTVMAVANGVVLPLMCIVFGDMTDSLVNSAIPNITANYSNASFPPSMYSDLEKE
MTTFAIYYSILGAVVLIAAYLQVSLWTLAAGRQVKLIRKLFFHRIMQQDIGWFDVNETGE
LNTRLTDDVYKIQEGIGDKVGMLIQSFSSFIAAFIIGFTKGWKLTLVILAVSPALGISAA
LFSKLLANFTTKEQSAYAKAGAVAEEVLSAIRTVYAFSGQKKEIERYHKNLEDAKSMGIR
KAISANIAMGFTFLMIYLSYALAFWYGSTLIMNNEYTIGSVLTVFFVVIIGVFAMGQTSP
NIQTFASARGAAHKVYSIIDHNPTIDSYSQTGFKPDFIKGNIEFKDIHFSYPSRPDVKIL
DEMCLSVSSGQTMALVGSSGCGKSTTIQLLQRFYDPQDGFVSIDGHDIRSLNVSYLRGMI
GVVSQEPILFATTIAENIRYGRPDVTQMEIEQAAKEANAYDFIMNLPDKFETLVGDRGTQ
MSGGQKQRIAIARALVRNPKILLLDEATSALDAESETIVQAALDKVRLGRTTLIVAHRLS
TIRNADVIAGFQQGKVAELGTHSDLMAKHGVYHTLVTMQTFQKAEDDEDEGELSPGEKSP
VKDPMRESTLLRRKSTRGSSFAASAGEKGEKGKNDEDKAEEEEAVPMVSFFRVLRLNASE
WPYILVGLICATINGAIQPLFAVLFSKIITVFAEPDLDVVRERSNFFSLMFVAIGVVCFF
TMFLQGFCFGKSGEILTLKLRLGAFKSMMRQDLGWFDSPKNSTGALTTRLATDAAQVQGA
SGVRLATFAQNIANLGTGVILAFVYGWELTLLILAVVPVIALAGAVQMKMLTGHAAEDKK
ELEKAGKIATEAIENIRTVASLTREPKFESLYQENLVVPYKNSQKKAHVHGFTFSFSQAM
IYFAYAACFRFGAWLIIQGRMDVEGVFLVISAVLFGAMAVGEANSFAPNYAKAKMSASHL
LMLLNKEPEIDNLSEQGDKPDTFDGNVSFESVKFNYPSRPDIPILRGLNLSVKKGETLAL
VGSSGCGKSTTIQLLERFYDPREGRVVMDKIDVKQLNICWLRSQIGIVSQEPVLFDCTLA
ENIAYGDNTRKVTMEEIEAAAKAANIHNFINELPQKYNTQAGDKGTQLSGGQKQRVAIAR
AILRNPKVLLLDEATSALDTESEKVVQDALDQASKGRTCIIVAHRLSTIRNADRIAVFQG
GVVVEQGTHQQLLAKKGVYHMLVTTQLGHRTE
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaaagcgagatggaaatgaagtccgaagtcaaacattttcaaaatggaagt
ctgggtgagaaagaagagaatgatgaaaagaaaagtaaaaagaaaaagaagaaggaaaag
gagccgaaggagcccatggtcggcccactctctgtgttcaggtttgcagacagatgggac
atcctgatgatcttcgttgggactgtgatggccgtggccaatggggtcgttctccctctc
atgtgcatcgtcttcggagacatgacggacagtcttgttaacagcgccatacccaacatc
accgcaaactactccaatgcctcattcccaccaagcatgtacagcgatttagagaaggaa
atgacgacctttgccatctactactccatcttgggagccgtcgtgctgattgccgcctac
ctgcaggtgtccctctggacgctggcggccggacggcaggtgaagctcatccgcaagctg
tttttccacagaatcatgcagcaggacatcggctggttcgatgtcaacgagacgggagag
ctcaacacgcggctcacagatgacgtctacaaaatccaagagggcattggtgacaaggtg
gggatgttgattcagagtttcagcagcttcatcgcagccttcatcatcggtttcaccaaa
ggctggaaactcaccctcgtcatcctggctgtgagtccggctctgggcatctcagctgca
cttttcagtaagctgctggcgaacttcacaaccaaagagcagagtgcatatgccaaagcc
ggcgctgtggcggaggaagtgctctccgccatcaggacagtgtatgccttcagcggacaa
aagaaggagatcgagagatatcacaagaacttggaggatgctaagtcgatggggataagg
aaggcgatctctgccaacatcgccatgggattcacctttctgatgatctacctgtcttac
gctctggccttttggtacggcagtaccctcatcatgaataatgagtacaccattggatct
gtgctcactgtgttctttgttgtgattattggagtgtttgcaatggggcagacttctccc
aacatccagacgtttgctagcgcccgcggagccgcccacaaggtgtacagcatcatcgat
cataacccaaccatcgacagctattcacagacgggctttaagccggacttcatcaaagga
aacatagagttcaaagatatccacttcagctacccgtccaggcctgatgtcaagatatta
gatgaaatgtgtttaagtgtgagcagtggacagaccatggcgctggtgggcagcagtgga
tgtggtaaaagcacgacgatccagctgctgcagaggttctacgatcctcaggatggattt
gtatctatcgatggtcacgacatccgctctcttaacgtgagctacctgaggggaatgatc
ggcgtggtgagccaggagcccatcctgttcgccaccaccatcgccgagaacatccgctac
gggcggcctgacgtgacgcagatggagatcgaacaagctgccaaggaagccaacgcttac
gacttcatcatgaaccttcctgataagtttgagaccctggtcggtgaccgagggactcag
atgagcggaggacagaagcagaggattgcgattgctcgagctttggtccgcaaccccaaa
atccttctgctggacgaagccacgtctgcgctggacgctgagagcgagaccattgttcaa
gctgcactggataaggttcgactgggtcgtacgacactaattgtggctcaccgcctctca
acaatcagaaatgccgacgtgattgcaggcttccagcagggtaaagttgcagagttgggc
actcacagtgacctgatggcgaaacacggagtctaccacacgctggtcaccatgcagacc
tttcagaaagcagaggatgatgaggatgaaggcgagctgtccccaggtgagaaaagtccc
gtgaaagaccccatgagagagtctacgctgctgaggaggaagtctacaagaggatcctcg
ttcgctgcttcagctggagagaaaggagaaaagggaaagaacgatgaggacaaagcagaa
gaagaggaggccgtccccatggtgtcgttctttagggttctgcgcctcaatgcttctgag
tggccttatattctggtgggactaatttgtgccacaataaacggagccatacagcctctg
tttgccgtcctcttctccaagattatcactgtgtttgcagagccagatttagacgttgtc
agagaaagatcaaacttcttctcgctcatgtttgtcgctatcggagttgtttgctttttc
accatgtttctacagggattctgttttggaaaatctggagaaattctcaccctgaagctg
aggcttggtgccttcaagtccatgatgagacaggatctcgggtggtttgacagccccaaa
aacagtaccggggcgctcaccaccagactggctacagacgcagcccaagtgcagggggcg
tcaggagtgcgcctggcgaccttcgcccagaacatcgccaacctcggcaccggtgtgatc
ctggcgtttgtgtacggctgggagctaacgctgctgattttggccgtggtgcccgtcatt
gcgctggccggagccgttcagatgaaaatgctcactggacatgcagccgaagacaaaaag
gagctggagaaggctggaaagatagccacagaggctatagagaacatccgtactgttgcc
tctctcacaagagaaccaaaatttgagtctttgtatcaggaaaatctcgtagttccttat
aagaactctcagaaaaaggcccatgtgcacggcttcaccttctccttctcccaggcgatg
atctactttgcctacgcagcctgttttcgattcggagcctggctcatcatacaaggaagg
atggatgtggagggagtattcctcgtgatttctgcggttctgttcggagccatggccgtc
ggcgaggccaactccttcgctccgaactatgccaaggccaaaatgtccgcctcccacctg
ctgatgctgctgaacaaagagcctgagatcgacaatctgtctgagcagggagacaagccg
gacacatttgatggtaacgtgagctttgagagtgtgaagtttaactatccgtcgcggcct
gacataccaatcctgcgaggcctgaatctgagcgtgaagaagggagaaactctggccctg
gtggggagcagcggctgtggaaagagcaccaccatccagctgctggagaggttctacgac
cccagagagggccgagtggtgatggacaaaatcgacgtcaaacagctgaacatctgctgg
ctcagatctcagatcggcatcgtgtcccaggagccggtgctgttcgactgcacgctagcg
gaaaacatcgcctacggagacaacacccgcaaagtgaccatggaggagatagaggcagct
gccaaagccgccaacattcataacttcataaatgaactgcctcagaagtacaacactcag
gcgggcgataaggggactcagctgtccggcggtcagaagcagcgagtggccatcgccagg
gccatcctccgcaacccgaaagtgctgctcctggacgaggccacctctgctttggacaca
gagagcgagaaggtggtgcaagacgccctggaccaggccagcaaaggcagaacatgcatc
atcgtggcgcaccgtctctccaccatccggaacgccgaccgcatcgccgtcttccaggga
ggcgtggtggtggagcaggggacgcatcagcagctgctggcaaagaagggagtctaccac
atgctggtcaccacacagctgggccacaggactgagtga
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