Xiphophorus hellerii (green swordtail): 116717406
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Entry
116717406 CDS
T07363
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116717406
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116717406
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116717406
NCBI-ProteinID:
XP_032414662
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Position
3:complement(14337816..14358548)
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AA seq
412 aa
AA seq
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MLSSPTVILQPYGLPVYPQTTTCYPSLVQGGPAQEPGAGSADPALPQVYAPPPSYPPPTQ
GPPTSASRLPTLDFSSHSSDYPEHPQLRVYQGPQLEGADTLTPSNTEDALASVTSDPQAL
GVSVSSGAGAGTGTEEESSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE
RGSKGFGFVTFESATEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLMNGEISTS
GWKINPVMGAMYAPELYTGGLIYIPTSVRAFIVHFTVKEVYFLSISMFVVASFPYPVATP
TLAYRGSALRGRGRAVYNTIRSAAGAPAAVPAYPGVVYQDGLYGAEVYGGYPTAYRVAQS
ASAATAAYSDGYGRVYAAAADPYHHSVGPTATYGVGTMASLYRGGYNRFTPY
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctcacccactgtgatcctccagccttacggacttcccgtctatccacagaca
accacatgctaccccagcctagttcagggggggcccgcccaggagcccggagccggcagc
gcagaccccgccctcccacaggtttatgctccaccgccttcgtatcctccgcctactcaa
ggcccaccaacatctgccagcaggctgcccactcttgatttcagctcgcacagctccgac
taccctgaacacccccagctcagggtctatcagggcccccagctcgaaggggccgacacc
ctgacccccagcaacacggaggatgctttggccagcgtgacctctgacccccaggctctc
ggtgtgtctgtgtcgtcgggggcaggagcgggaaccggaacagaggaggaaagctcaggg
aaggcccaaccaaaacgcctgcatgtctccaacatccctttccgcttcagagaccccgac
ctccgccagatgtttgggcaatttggcaaaatcctcgatgtagaaatcatcttcaatgaa
agagggtcaaagggttttggatttgtgacttttgagagtgctacggaggcagaccgagcg
agagaaaagctaaatgggacgatcgtagaagggaggaagattgaggtcaataatgccact
gcaagagtagtgaccaagaagcctcagacacctcttatgaatggagaaatatcaacatct
ggttggaagatcaaccctgtaatgggagcaatgtacgcacctgagctttatacaggtggg
ctgatttatattcctacatcagtgagagcctttattgtacatttcactgtgaaagaagtt
tattttctctcaatttctatgtttgtagttgccagttttccataccctgtagcgactcct
accttggcctaccggggatctgcactgcgaggtcggggtcgtgccgtctacaacaccatt
cgttctgcagccggcgcgcctgctgctgttcccgcctatccgggggttgtatatcaggat
ggactctatggagcagaagtttatggaggttatcctacagcgtacagagtggctcagtct
gcatctgctgctacagcagcctacagtgacggatacggacgggtttacgccgcagctgcc
gacccttatcaccactcagttggaccaacagccacatatggagtcgggacgatggccagc
ctgtaccgaggaggatacaaccgcttcaccccctactga
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