Xiphophorus hellerii (green swordtail): 116718054
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Entry
116718054 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116718054
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116718054
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
MRP-S31
Gp58
DUF4239
Motif
Other DBs
NCBI-GeneID:
116718054
NCBI-ProteinID:
XP_032415587
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Position
4:3533292..3535251
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AA seq
395 aa
AA seq
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MKMFCRTDQKCICFLCTMEEHKNHITVSAAVERTERQRKLEKRQGKIQRRIKDREKDVKL
LQQEVEAINRSADKTVEDSEKIFTELIRLLQKRSSDVKQQIRSQQETEVSRVKDLQEKLE
QEIPELKRKDAELEQLSHTEDHTQFLLNYPSLPALSKSTHSSSINVRPLRHFEDVTAAVS
ELREKLHDVLRDSWTNILHRLNDVDVLLSEPKSRAGFLKYSREITLDPNTANTRLVLSEG
NRKVKLMIQRQSYSNHPDRFTGCYQVLSRESLTGRCYWEVKRSATQVYVAVTYKNISRKG
GKNECGFGNDEKSWALECSKNSFKFGHNNIWTSVSGPVPSTVGVYLDHRAGILSFYSVSE
TLTLLHRVQATFTEPLLAGVFVCSIGGSAEFCKPK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttttgtcgcactgatcagaagtgtatttgttttctctgcaccatggaagaa
cataaaaaccacattacagtctcagctgcagtagaaaggactgagaggcagagaaagctg
gagaagcgacaaggaaaaatacaacgcagaattaaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatcgctctgctgataaaacagtggaggacagtgag
aagatcttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcaacag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagatcttcaggagaagctggag
caggagatccctgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacacccagtttctcctcaactacccctcactgccagcactcagtaagtctacacac
tcatccagcatcaacgtccgtcctctgagacactttgaggacgtgacagcagctgtgtca
gagctcagagagaaactacacgacgtcctgagagactcatggacaaacatcttacataga
cttaatgatgtggatgttttactgtcagaaccaaagagcagagctggattcttaaaatat
tcacgtgaaatcactctggatccaaacacagcaaacacacgactggtactatcagagggg
aacaggaaggtgaaactgatgattcaacgtcagtcctattctaatcacccagacagattc
actggatgttatcaggttctgagtagagagagtctgactggacgttgttactgggaggtt
aagaggagtgcaacacaagtttatgttgcagtcacgtacaagaatatcagcagaaaagga
ggtaaaaatgaatgtggatttggaaatgatgaaaagtcttgggctttagagtgttccaaa
aacagttttaaatttggtcacaacaacatctggacctccgtctcaggtccagttccctcc
acagtcggagtgtacctggaccacagagcaggtattctgtccttctacagcgtctctgaa
accttgactctcctccacagagtccaggccacattcactgaaccgctactggctggagtt
tttgtttgttccattggaggttctgctgagttttgtaaacccaagtag
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