Xiphophorus hellerii (green swordtail): 116719494
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Entry
116719494 CDS
T07363
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116719494
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116719494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116719494
NCBI-ProteinID:
XP_032417912
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All DBs
Position
5:complement(11442790..11492167)
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AA seq
487 aa
AA seq
DB search
MLMSTDVASIMLPVSRALIDRDRELETMAGVHANPSGAPGAVRGMKRGDPEPDGQTAAAL
VDSTGAECKRPRIDGSGGIGEIGQNNDPLTLGYHGYPSHSQEAVLFMRSQPSASANCYGG
LLTSPPTCAVTGSQDSAGGQEGLVPPPFSAFPPPPPPPPQNGLTLDYGSSLYAAGAVQGP
VEAGGASNSAANPGNSLSQSDGSSQIDGQSVVGSGGGGGGGGPGDDSDAKGTPKRLHVSN
IPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSSDAERAREKLHGTLVEG
RKIEVNNATARVMTNKKMTTPYANGEGLAALPYAGWKLSPMVGAMYSPELYTVPGFPYPA
AAAAAAAASTAATFRGTHLRGRARPVYSAVRAAVPQPAIPAYPGVMAYQDGFYGAADLYG
GYAAYRYAQPAAVATPAAAAAAAAAYSDSYGRVYTADPYHAALAPAAYGVGAMATLYRGG
YSRFAPY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatgctgcctgtgtcccgggctctcatagac
cgggacagggagctggagaccatggccggggttcacgccaacccgtccggtgctccagga
gccgtgcgaggcatgaagcgcggagacccggagcccgacggacagacggcggccgctctg
gtggactccactggggctgagtgcaagcgccccagaatcgacggctcaggagggatcggc
gagattggacagaacaacgatcctttgaccctcggctaccatggatacccatctcacagt
caggaggccgtcttgttcatgagaagccagccaagtgctagtgcaaactgctatggtggt
ttgctgacatcaccgccaacatgcgccgttaccggctctcaggatagtgctggcggtcag
gaaggactcgtacccccacccttctccgccttcccacctcctccgcctccgcctcctcag
aacggcctgaccctggattacgggagcagcctgtatgcagccggagcggtgcagggcccc
gtggaggctggtggagcaagcaacagcgcggccaaccccggcaatagcctcagccagtct
gatggctcctctcaaattgacgggcagtctgtagttggctcaggtggagggggcggcggc
gggggccctggggatgattcggacgccaaggggacgcccaaacgtctccatgtgtctaac
atccccttccgcttccgagaccccgacctacggcaaatgtttgggcaatttggcaaaatc
cttgatgttgagatcattttcaacgagaggggctccaagggcttcgggtttgttacgttt
gagaccagctcagatgcagagagggccagggagaagctccacggcacgctggtggaagga
cgtaaaatcgaagttaataatgccacagccagagtgatgacaaacaagaaaatgaccaca
ccatatgctaatggagagggccttgcagcacttccatatgctggttggaagttaagtcct
atggttggagccatgtacagtcctgagctctatacagttccagggttcccgtacccggca
gcagcagcagcagcggctgccgcttccaccgctgcgacctttcgaggaacgcatttgcgg
ggtcgagctcggcctgtctacagcgcggtcagggctgccgtcccacaacctgccatccca
gcataccctggtgtgatggcctatcaggatggtttttacggtgcagctgacctctatggt
ggctatgcagcgtatcgttatgcccagccggctgctgtagcgactcctgcagcagcagcc
gctgcagcagcagcttacagtgacagctacggacgagtttacacggcagatccctaccat
gctgcactggccccagcagcctatggtgttggagccatggccacactctacaggggaggc
tacagcagatttgccccttattaa
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