Xiphophorus hellerii (green swordtail): 116719502
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Entry
116719502 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116719502
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116719502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
U-box
Mt_ATP-synt_D
zf-C2H2
SMC_N
Gp58
Motif
Other DBs
NCBI-GeneID:
116719502
NCBI-ProteinID:
XP_032417921
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Position
5:complement(30488341..30490958)
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AA seq
554 aa
AA seq
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MAQAGVQQDQERFSCSICWDLLKDPVTTSCGHSYCMSCIKGHWDVEDQKGIHSCPQCRKT
FNRRPDLQKNTLLAELVEDLKKTGLRHAPADHCYAGPGDVACDVCTGRKMKAVKSCLSCL
ASYCLRDLQPHYDAPPLKKHKLIPPTKRLQENLCSRHDEVMKIFCRTDQQSICYLCTMDE
HKGHETVPAAAERTGKQKELQVRRQQIQQRIQNREEDMKLLQQEVEVINVSADKTVEDSE
KIFTELMRLLQKRSSEVKQRIRSQQETEVNRVKDVQEKLEQEITELKRKDAELEQLSHTE
DHNQFLLNYPSLPELSESTRSSSIDIRPLRHFEDVTAAMSELREKLQDVLRDMWTNVPLT
VPLVDVLLSEPEPKTRNDFLKYSKRITLDPNTANNFLLLSEGNKKVTLVEEDQFYFDHPD
RFTNCTQILSRESLTGRCYWEVEWSGTEVDLAVSYKSISRSEGDCDFRNTDKSWTLYCHK
QNYIFFHNRVETRMSVPVSSRVGVYVDHRAGVLSFYRVSGTMTLLHRVQTCFTQPLHAGV
GFYSYGDSVTFIEV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcaggggttcagcaggatcaggaaaggttctcctgttccatctgttgggat
ctactgaaggatccggtgactacatcctgcggacacagctactgcatgagctgtattaaa
ggccactgggatgtagaggaccagaagggaatccacagctgtcctcagtgcaggaagact
ttcaatcgcagacccgacctccagaaaaacaccctgttagcagagttagtggaggacctg
aagaagactggactccgacatgctccggccgaccactgttatgctggacctggagatgtg
gcctgtgatgtctgcactgggaggaagatgaaagctgtcaagtcctgtttatcctgtttg
gcctcctactgcctgagagacctccaacctcactatgatgctccgcctttgaagaagcat
aaactgatccccccgacgaagaggctccaggagaacctctgcagtcgtcatgacgaggtg
atgaagatcttctgtcgtactgatcagcagtccatctgttacctctgcactatggatgaa
cataaaggccatgaaacagtgccagctgcagcagaaaggactggaaagcagaaggagctc
caggtgaggcgacaacaaatccagcagagaatccagaacagagaggaagacatgaagctg
cttcaacaggaagtggaggtcatcaatgtctctgctgataaaacagtggaggacagtgag
aagatcttcactgagctgatgcgtctcctccagaaaagaagctctgaggtgaagcagcgg
atcagatcccagcaggaaactgaagtgaatcgagtcaaagatgttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagaactcagtgagtctacacgt
tcatccagcatcgacatccgtcctctgagacactttgaggacgtgacagcagctatgtca
gaactcagagagaagctacaggacgtcctgagggacatgtggacgaatgtcccactgaca
gtccccctggtggatgttctcctgtcagaaccagaacctaagaccaggaatgacttcttg
aaatattcaaaaagaatcactctggacccaaacacagcaaacaactttctgttgttatcc
gagggaaacaagaaagtgactctagtggaggaagaccagttttattttgatcatccagac
agattcaccaactgcactcagatcctcagcagagagagtctgactgggcgctgttactgg
gaggtggagtggagcgggacagaagtcgatttagcagtttcatacaagagcatcagcagg
tcggaaggtgactgcgattttcgaaacactgacaaatcttggacattatattgtcacaag
caaaattacatattttttcacaacagagtagaaactcgaatgtcagttccggtttcgtcc
agagtaggagtgtacgtggatcacagagccggtgttctgtctttctaccgcgtctctgga
accatgactctcctccacagagtccagacctgcttcactcagccgctgcatgctggagtt
gggttttatagttatggagactctgttacgtttattgaagtgtaa
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integrated database retrieval system
