Xiphophorus hellerii (green swordtail): 116720953
Help
Entry
116720953 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116720953
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116720953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_6
zf-RING_5
zf-RING_10
zf-ANAPC11
MRP-S31
zf-Nse
Gp58
Motif
Other DBs
NCBI-GeneID:
116720953
NCBI-ProteinID:
XP_032420368
LinkDB
All DBs
Position
6:complement(28369128..28377143)
Genome browser
AA seq
560 aa
AA seq
DB search
MEQQAVQLDRETFSCPICLDLLKEPVGIPCGHSYCMNCIKDHWDKEDQKGVHSCPQCRKA
FTLRPDLEKNTMLAALVGQLKKTGLQAAAADLRSAGPEDVACDSCTGRKLKAIKSCLVCL
ASYCEKHLQPHYDVAPLKKHKLVEPSKNLQENICSKHDEVMKMFCRTDQTFICSLCLLDE
HKGHDTVSVAAERTERQRELEERRGNIQQRIQDREKDVKLLQQEVEAINHSADKTVEDSE
KIFTELICLLQKRRSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTE
DHNQFLLNYPSLPALSESTHSSSINIRPLRHFEDVAAAVSELREKLQDVLRDSWTNISLM
VTEVDVLLSEPEPEPEPTTRAGFLKYSCEITMDPNTAHTYLKLSEGKRKVTVMDQHQSYP
SHPDRFTDYCQVLSKESLTGCSYWEVEWRGSEIYVAVAYNNIKAGSGNECKFGGNDKSWA
LKCSQKGYQFGHKNIWTSISGPRSSRVGVYLDHRAGILSFHSVSGSMTLIHRVQTRFTEP
LHAGVWIWNIGNSAEFCKPK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaggcagttcagctggaccgggaaactttctcctgtccgatctgtttggat
ctactgaaggaaccagtgggtataccttgtggacacagctactgtatgaactgtattaaa
gatcactgggataaagaggatcagaaaggagttcacagctgtccacagtgcagaaaagcc
tttacactgaggcctgacctggagaaaaacaccatgctagcagctttagtggggcaactg
aagaagactggactccaagctgctgctgctgatctccgttctgctggacctgaagatgtg
gcctgtgattcctgcactggaagaaaactgaaagccatcaagtcctgtttagtctgtctg
gcctcttactgtgagaaacaccttcagcctcattatgatgtggctcctttaaagaaacac
aagctggtggagccgtccaagaacctccaggagaacatctgctctaagcatgatgaggtg
atgaagatgttctgccgcactgatcagacgtttatctgtagtctctgtttactggatgaa
cataaaggtcatgacacagtgtcagttgcagcagaaaggactgagaggcagagagagctg
gaggagagacgaggaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatcactctgctgataaaacagtggaggacagtgag
aagatcttcactgagctgatctgtctcctccagaaaagaagatctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctgagacactttgaggacgtggcagcagctgtgtca
gagctcagagagaaactacaggacgtcctgagagactcatggacaaacatctcactgatg
gtcactgaggtggatgttctactgtcagaaccagaaccagaaccagaaccaacgacaagg
gctggattcttaaaatattcatgtgaaatcacaatggatccaaacacagctcacacttat
ctaaagctatcagagggaaagaggaaggtgacagtgatggatcaacatcagtcttatcca
agtcacccagacagattcactgattactgtcaggttctgagtaaagagagtttaactgga
tgtagttactgggaggtggagtggagagggagtgaaatttatgtagcagttgcatacaac
aatatcaaagcaggaagtgggaatgaatgtaaatttggaggtaatgacaaatcctgggct
ttgaagtgttcccaaaaaggttatcaatttggccacaagaacatctggacctccatctca
ggtcctcgttcctccagagtcggagtgtacctggatcacagagcaggtattctgtccttc
cacagcgtctctggatccatgactctgatccacagagtccagaccagattcactgagccg
ctacacgctggagtttggatttggaacattggaaactctgcagagttctgtaaacccaaa
taa
DBGET
integrated database retrieval system
