Xiphophorus hellerii (green swordtail): 116721247
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Entry
116721247 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116721247
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116721247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_10
zf-RING_5
zf-RING_6
MRP-S31
Motif
Other DBs
NCBI-GeneID:
116721247
NCBI-ProteinID:
XP_032420746
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All DBs
Position
6:26922690..26924688
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AA seq
561 aa
AA seq
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MAQQENQPDRLKFSCLICLDLLKDPVTPSCGHSYCMNCIESFWDGEDQKGIHSCPQCRKT
FIPRPVLKKNIMLADLIEELKKTGLQAAPADHRYAGPEDVACDFCTGRKLKAIKSCLVCL
ASYCEKHLQPHYDVAPLKKHKLVEPSKNLQENICSRHDEVMKMFCRTDQKCICYLCSVDE
HKGHDTVSAAAERTERQRELEEKQKKIQHLIQDREKDVKLLQQEVEAINHSADKTVEDSE
KIFTELIRLLQKRSSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTE
DHNQFLLNYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELREKLQDVLRDSWTNISLM
VTGVDVLLSEPESEPEPKSRAGFLKYSCEITLDPNTAQTHLKLSEGNRKVVLMDQPQIYP
SHPDRFTHYHQVLSRESLTGRCYWEVEWSGGGVFIAVAYKKISIAGSGHNCGFGNTDKSW
ALNCFQFAYQLVHNNISTFISGPVSSRVGVYLDHKAGILSFYRVSESMTLIHRVQTRFTE
PLLAGVYVYHNGGSAEFCKLV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagaaaatcagcctgaccgactaaaattctcctgtttgatctgtctggat
ctactgaaggatccagtgactccttcctgtggacacagttactgtatgaactgtattgaa
agcttctgggatggagaagatcagaaaggaatccacagctgccctcagtgcaggaaaacc
ttcataccaaggcctgtgctgaagaaaaacatcatgcttgctgatttaatagaagaactg
aagaagactggactccaagctgctcctgctgaccaccgctatgctggacctgaagatgtg
gcctgtgatttctgcactggaagaaaactgaaagccatcaagtcctgtttagtctgtctg
gcctcttactgtgagaaacaccttcagcctcattatgatgtggctcctttgaagaaacac
aagctggtggagccgtccaagaacctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgcactgatcagaagtgtatctgttatctctgctctgtggatgaa
cataaaggccatgacacagtgtcagctgcagcagaaaggactgaaaggcagagagagctg
gaggagaaacaaaagaaaattcaacacttgattcaagacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatcactctgctgataaaacagtggaggacagtgag
aagatcttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtca
gagctcagagagaaactacaggacgtcctgagagactcatggacaaacatctcactgatg
gtcactggggtggatgttctactgtcagaaccagaatcagaaccagaaccaaagagcaga
gctggattcttaaaatattcttgtgaaatcactctggatccaaacacagcacaaacacac
ctgaaactatcagaagggaacaggaaggtggtattgatggatcaacctcagatttatcca
agtcatccagacagattcactcattaccatcaggttctgagcagagagagtctgactgga
cgttgttactgggaggtggagtggagtggaggaggagttttcatagcagttgcatacaag
aaaatcagcatagcaggaagtggacataattgtggatttggaaatactgacaaatcttgg
gcattaaattgtttccaatttgcttatcagttggttcacaacaacatctcaaccttcatc
tcaggtccagtttcctccagagtgggagtgtacctggatcacaaagcaggtattctgtcc
ttctatagagtctctgaatccatgactttgatccacagagtccagaccagattcactgaa
ccgctgctggctggagtttatgtttatcacaatggaggctctgcagagttctgtaaactc
gtataa
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