Xiphophorus hellerii (green swordtail): 116721458
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Entry
116721458 CDS
T07363
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116721458 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116721458 (wdr33)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116721458 (wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
116721458
NCBI-ProteinID:
XP_032421089
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All DBs
Position
6:complement(30392885..30410258)
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AA seq
1006 aa
AA seq
DB search
MATDVGSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPLGMLNNPMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HSGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDVEPNSLATIPGMGIPEQLKAAMEQEQSSKEAAAEVEMSIPGLDWGMDE
VMGRDSKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPPSADLSKDRNLEQKVEGKKKTQA
ELEQEMAALQYTNPHLLEQMKMSQMNSDGNMGPPQGPGSMPPFPGPGGPGPPGQQGYAPN
MPHQQMAPPMGPAGMQQPFMQPGQMGPPSGPPSHQGPPQGMMGPSDMQEPQRHPGPPRHM
GPPGPHGMGPRGMQGPPGGMMGHPPRGIGLRDPQGPPPQGNMMVPQGQMQGGMMGPPPRT
HGNMPNNYGMGNIQGSQGGMQGPPYMQHQGQNSGPMMHGMGPPGPNSKGDHRGPPPNHHM
GPTDRQGPGGPGGPDQGSYWGDGQQGRRGPQDGGQDFHSRGEDSWRPGYQGGGHRGGGHR
GGGAWGSDDRFGAGDFRGRRDDRFRGGGAGRGGRGYSEDYGGQEEGFDGGEEVGRGWESG
GRGRPPRGAGHDGFRDDGSSPGGRERPSSMQGMDMASLPPRKRPWQDGPGTGDHEAPEGG
GRPQRDDGGYGPPGRGGRGGWGPGGPVLRRGGPPPRGGPRAGGRGR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacgtgggctcgccgcagcggttcttccacatgccgcgtttccagcaccag
gcgccgcgacaggtgttctacaagcggcccgacttcgcgcagcagcaggccatgcagcag
ctcaccttcgacgggaagcgcatgaggaaggccgtcaaccgcaagaccatcgactacaac
ccgtccgtcatcagatacctggagaaccgcctgtggcagcgcgaccaccgggacttcagg
gccatccaacccgacgccggctgctacaacgacctggttcctcctctgggaatgctcaac
aacccgatgaatgctgtcaccaccaagtttgtccggacctctaccaacaaagtcaagtgt
cccgtcttcgtcatcaggtggacccctgagggccgccggctggtgaccggggcctccagt
ggagagttcaccctgtggaacggactcaccttcaactttgagaccatcctacaggcccat
gacagcccggtgcgggccatgacctggtcccacaacgacatgtggatgctgacggcggac
cacagcggctacgtcaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggccattagagaagccagcttctctcccaccgacaacaagttcgccacctgc
tccgatgacggcaccgtccggatctgggacttcctgcgctgccacgaggagcggatcctt
cgaggtcacggcgccgacgtgaagtgcgtggactggcaccccaccaaggggctggtggtg
tctggcagcaaggacagccagcagcccatcaagttctgggaccccaagacgggtcagagc
ctggccacgctccacgcccataagaacacggtgatggaggtgaagtggaacctgaacggg
aactggctgctgacggcgtcccgcgaccatctctgcaaactcttcgacatccggaacctg
aaggaggagctgcaggtattccggggccacaagaaggaggccacagcggtcgcctggcac
ccggtccatgagggtttgttcgccagcggaggctccgacgggtcactgctgttctggcat
gccggggtggagaaggaggtgggcggcatggagatggcccatgaagggatgatctggagt
ctcgcctggcaccctctgggtcacatcctgtgttctggttccaacgaccacaccagtaag
ttctggaccaggaaccgacccggagacaagatgagagaccggtacaacctgaacctgctt
cccgggatgtcggaggacggcgtggagtacgatgatgtggaacccaacagcctggccacc
attcctgggatgggcatcccggagcagctgaaggcggccatggagcaggagcagagcagt
aaagaggcggctgccgaggtggagatgtccatccctggactggactggggcatggacgag
gtgatgggccgggactccaagaaggttcctcagaagaaggttccgtacgccaaaccgatc
ccggcgcagttccagcaggcttgggcggagaacaaagttcccatgatgcccccgtctgca
gatctgtcaaaggaccggaacctggagcagaaggtggaggggaagaagaagacccaggcg
gagctggagcaggagatggcggcgctgcagtacaccaacccccacctgctggagcaaatg
aagatgagccagatgaactcggatgggaacatgggccccccccagggaccgggctccatg
cccccctttccgggccccggggggccgggccctcctggtcagcagggctacgctccaaac
atgcctcaccagcagatggcgcccccaatgggccccgcagggatgcaacagccctttatg
cagcctggacagatgggacctccttctggacccccatctcatcagggtccccctcaaggc
atgatgggcccctcagacatgcaagaaccacagagacatcctggcccgccgagacacatg
ggccccccaggacctcatgggatggggcccagaggcatgcaggggccccctggtgggatg
atggggcatcctcctcgaggaattggtttaagggaccctcaggggcccccgccccaaggg
aacatgatggttccccagggccaaatgcagggtggaatgatggggcccccacccaggaca
catggcaacatgcctaacaactatgggatgggcaacatacaggggtcccaaggaggcatg
caggggcccccgtacatgcagcaccagggccagaactcgggacccatgatgcatgggatg
gggcccccggggcccaacagcaaaggagaccatagagggccgcccccgaaccaccacatg
ggtcccacagaccggcaggggcccggaggcccggggggcccagaccaaggctcttactgg
ggagacggccagcagggccggaggggcccccaggatggaggacaggacttccacagccgg
ggggaggacagctggaggccggggtaccagggggggggccaccgagggggtgggcaccgg
gggggcggggcctggggctccgacgaccgcttcggtgcgggggacttcagaggacggcgg
gacgacaggttccgagggggcggggcgggccgaggggggcggggctacagcgaggactat
ggcggccaggaggagggctttgacggcggcgaggaggtcggccgaggctgggagtccggg
ggccgagggaggcccccccgaggagcaggccatgacgggtttcgggacgacggttcgtct
ccgggggggcgggagcgtccctcgtccatgcaggggatggacatggcgtccctgccgccc
cggaagcgtccctggcaggacggccccgggaccggggaccacgaggctccagaaggaggc
ggacgacctcagagggacgacggcggctacggccccccggggcggggcgggcggggcggc
tggggcccaggggggccggtgctgaggaggggggggccgccacccagaggggggccgagg
gccggcgggcggggccggtag
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