Xiphophorus hellerii (green swordtail): 116723371
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Entry
116723371 CDS
T07363
Symbol
chpf
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
xhe01100
Metabolic pathways
Module
xhe_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116723371 (chpf)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xhe01003
]
116723371 (chpf)
Enzymes [BR:
xhe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
116723371 (chpf)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
116723371 (chpf)
Glycosyltransferases [BR:
xhe01003
]
Glycan extension
O-Glycan
116723371 (chpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
116723371
NCBI-ProteinID:
XP_032424098
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All DBs
Position
7:23211329..23225631
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AA seq
766 aa
AA seq
DB search
MRFSVFISVLRSLGPVVIGISLGFTLSLLSVSWTEEACPLEGKEGEDVASGQDGLLKGAR
KPSSISTGNDVESEEDFEPRIVPYKQVQPSAPKKVFRAKYISTELGMRERLFVGVLTSKN
TINTLGVAVNRTISHHLDIVVFFTGSRNRKVPHGMFVVSHGDERLIWNMYQTIRYVLDHY
INEYDWFYFVQDDAYTEADRIRELVEHLSVNRELYMGSPEEFIGGEMEGKYCYGGFGYLL
SRSLLLRLQPFLENCRNDILSSRPDEWLGRCIIDYTSTNCVSEHEGLEYHHYKLGKNSDP
NKEQNEKFKRALTVHPVSDPEQMYRLHRCFSEIELHKTYNEIAKLQAEIKNVSVLAFEGN
RSAQWPVGVNPPFEPKSRFEVLKWEYFTEEEIYSCIDSAPKCELRGIDKLDVAEVIDTAI
EELNKKYMPTLHLKKQQLINGYRRFDPTRGMEYTLDLQLEVINQKGHSRSITKRVHLVRP
LSLIEIIPMPYVTEATRVHIIIPLTAEDRSYVNHLMEVFASNAFETSENAILTFLFIYDP
EEAQHVNHNDIFIDVKNQINVYERKYPTVKIPWISVKTEIPSQIKFMDIISKKHPVDTLF
FLAHVNTNINGEFLNRCRMNSINNWQVFFPIHFQEYNPDVSYHNQPPPATVDLVKDAGQF
DRRSFDEACFYNSDYMATRSRMVADVQENEDILESLDIYDIFVKYSGLHVFRAVEPALHQ
QYRYQPCNPKLSEDIYHRCIQSNMEGLGSRSQLAMLLFEQEQGNST
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagattttcagtgtttatttctgtcctgcggtcgctcggccccgtggtaatcggcatt
tcattgggcttcacgttgagtttgttgagcgtgagctggacggaagaagcgtgtcccctg
gaggggaaggagggcgaggatgtggcttcgggtcaggatggactcctcaaaggagcccga
aagcccagctccatttccactggcaacgatgtggagtccgaagaggatttcgagccaaga
atagtcccttacaaacaagtccagccgagtgctccaaagaaagttttcagggctaagtac
ataagcacggagcttggcatgcgggagcgcctgtttgttggagtcctgacctccaaaaac
accatcaacaccctcggtgtggcggtgaaccgcaccataagccaccacctggacatcgtg
gtcttcttcaccggctcccgcaaccgcaaagtcccccacggcatgtttgtggtctcccac
ggagacgagaggctgatctggaacatgtatcagaccatcaggtacgtcttagaccactac
atcaacgagtacgactggttctacttcgtccaagacgatgcctacaccgaagccgaccgg
atcagagagctggtggagcacctgagcgtgaatcgagagctgtacatgggcagtcctgaa
gagttcatcggaggggagatggaagggaagtactgctatggggggtttgggtacctcctg
tcgcgcagcttgctcctgcgacttcaacccttcctggaaaactgcaggaacgacatcctg
agctccaggccagatgagtggctcggcagatgcatcatcgattacaccagcaccaactgt
gtcagtgaacatgagggactcgagtaccaccattacaagctcggaaaaaactcggaccca
aataaagagcagaacgagaagttcaagagagccctgactgttcatcccgtgtctgacccc
gaacaaatgtaccggctgcaccgatgcttctccgagattgagctgcataagacttacaat
gagattgctaagctgcaggcggagataaaaaatgtcagcgttctcgcttttgaaggcaac
cgaagcgcccagtggccagtcggggtcaatccgccttttgagcctaaatctcggtttgaa
gttctaaaatgggagtacttcacggaggaggagatttattcgtgcatcgacagcgctcct
aagtgtgagttgcggggtatcgataaactggatgtggcagaggtcatagacacagccata
gaggagctgaacaaaaagtacatgcccactttacatctgaagaagcagcagctgattaac
ggatacagacgcttcgaccccaccaggggcatggagtacaccttagaccttcagctggag
gtcattaatcagaaaggtcacagccgctccatcaccaagagagtccacctggtgcgacct
ctgagcctcatagagatcattcccatgccctacgtcaccgaagcgaccagggttcacatc
attatacctctgactgcagaagaccgcagctacgtcaaccatttaatggaagtctttgcc
tccaatgcctttgagacgagtgaaaacgccatcctcacgtttctgttcatttacgaccca
gaggaggctcaacacgtgaaccacaacgacatatttattgacgtgaagaatcagataaat
gtttacgaacgaaaataccccacggtgaaaatcccctggatcagcgtcaagacggagata
ccgtcccagattaagttcatggacatcatttccaaaaagcacccggtggacactttgttc
ttcctggcgcacgtcaacacgaacatcaacggcgagtttctcaaccgctgccgcatgaac
tctataaataactggcaggtcttcttccccatccacttccaggagtacaaccccgatgtt
tcctaccacaaccagccgccccctgccacagtcgacctggtgaaggatgccggacagttt
gaccgcaggtcatttgacgaggcgtgcttttacaactccgactacatggcgacgcgatcc
cgcatggtggcggacgtccaagagaacgaggacatccttgaaagcctggacatttatgac
atttttgtgaagtattctggtctgcacgtattcagagctgttgagccagctcttcaccag
cagtaccgctaccagccttgcaacccgaaactcagcgaagacatctaccaccggtgtatt
cagagcaacatggagggcctcgggtcccgatcgcaactcgccatgctgcttttcgaacaa
gaacaaggaaacagtacttga
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