KEGG   Xiphophorus hellerii (green swordtail): 116724509
Entry
116724509         CDS       T07363                                 
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
  KO
K14844  pumilio homology domain family member 6
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116724509 (pum3)
   03009 Ribosome biogenesis [BR:xhe03009]
    116724509 (pum3)
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     116724509 (pum3)
Ribosome biogenesis [BR:xhe03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    116724509 (pum3)
SSDB
Motif
Pfam: CPL PUF
Other DBs
NCBI-GeneID: 116724509
NCBI-ProteinID: XP_032426142
LinkDB
Position
8:2575417..2583781
AA seq 637 aa
MAAKPQKPFSSQPGRKPSFKGKGKGKDLAGTKFGGKPGAKKPFKPYKNAEKKSRPGKPND
GRKPGFSKAEKRKRPAGGGGPPAKREKNGKKPPTTEEELKKRLQKKRELKNNRQQAERKE
MFDIISRCKAVWGNLRRKKCDTEQKTKLMKELHGLIRGKIKQMAFAHDSVRVLQCFIQFG
NQKQRFEVFEELKDSVLDMSKSPYGKHVVKKLLMYGNKEMVAAIIQLFGGHIRKMLRHAT
ASTIVEYAYNDKAMLAQRLMITGELYGNTYAICKSLELNTIEKVLAANPEKLENILEETK
QAIVPLAQKEQVIRHSVVHKVFLDFFQFAPEKQRSEMIESIRESVVYMAHTHDGARVAMH
CLWHGTAKDRKVIIKTMKTYMVKFARGEFGHMVLLAIFDCVDDTKLVKQAVLSELLSVLP
EVLGNKHGKKVLLYLLRPRDPTHMLPDIVKLLEQGDGNAHSKKDMATRRRELLEAASPAL
LDHLQLNAAAMVTNKAASVTVRDILASACGDLRPAMTAVAQLANQELVQGGVEGQLHLAE
HPAGHLVLKWLIEQDAMLAENGREECFSRILVDTVGTETMKSWVKVNRGAMVLCSLLNSC
DGSVAAEVKAALTAIIPELRRISDHKGAEILLQNLNK
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggcagccaaaccccaaaagccgttctcctcccagcctggacgaaaaccgtcattcaaa
ggaaaaggaaaaggaaaagacttggcggggaccaaattcggagggaaacctggagcgaaa
aaacccttcaagccgtacaagaacgcagagaagaagagcagaccaggaaaaccaaacgat
ggcagaaaaccaggtttttctaaagctgagaagaggaaacgaccagcagggggcggaggt
ccgccggcgaagagggagaagaacggcaagaagccgccgaccacagaagaagagctgaag
aagcgactgcagaagaagagggagctgaagaacaaccggcagcaggcggagaggaaggag
atgtttgacatcatcagccgctgcaaagcagtatgggggaatctccggaggaagaaatgt
gacacagagcagaagacgaagctgatgaaggagcttcatggactgatccgtgggaagata
aagcagatggcgttcgcccacgactcggtccgagtcctccagtgtttcattcagttcgga
aaccagaagcagcgatttgaggtgtttgaggagctgaaagacagcgtcctcgacatgtcc
aagtcgccgtacgggaaacatgtggtgaagaagctgctgatgtacgggaacaaggagatg
gtggccgccatcatccagttgttcggtggtcacattcgcaagatgctccgccacgccacc
gcctccaccatcgtcgagtacgcctacaacgacaaggcgatgctcgctcagaggctgatg
atcaccggcgagctgtacgggaacacctacgctatctgcaagtcgttggagcttaacacc
atcgagaaggtgttggcggcgaacccggagaagctggagaacatcctggaggagaccaag
caggccatcgtgccgctggcgcagaaagaacaggtcatcaggcattctgtggtccataaa
gtctttctggatttcttccagtttgcacctgaaaagcaaagatcggagatgatcgagtcc
atcagggagtctgtggtctacatggctcacactcacgacggcgcccgggtcgccatgcac
tgcctgtggcacggcacagcaaaggacagaaaagtcattataaaaaccatgaagacctac
atggtgaagttcgccaggggggagtttggtcacatggttctcctggcgatatttgactgc
gtggacgacaccaagctggtcaagcaggcggttctgtcggagctgctgtccgtcctgccg
gaggtcctcggaaacaaacacggtaagaaggttctgctgtacctgctgaggcccagagac
cccacccacatgctgccggacatcgttaagctgctggagcaaggagacggcaacgcacac
agtaaaaaggacatggcgacccgccggcgggagctgctggaggccgcctccccggcgctt
ttggaccatctccaactgaacgctgctgccatggtaacgaacaaggcggccagcgtcacc
gtcagagacatcctggcgtcggcgtgcggcgacctgcggcctgccatgacggccgtggcc
cagctggccaatcaggagctggtgcagggaggagtcgagggccagctccacctggccgaa
cacccagcaggacacctggtgctgaagtggctcatagagcaggacgccatgttggccgag
aacggcagggaggagtgcttcagcaggatcctggtggacacggtggggacggagaccatg
aagagctgggtcaaggtcaaccggggagccatggtgctctgcagccttctgaacagctgt
gacggatctgtggctgctgaggtgaaggcggcactcaccgccatcatccctgagctccgg
agaatcagcgaccataaaggagccgaaatcctgctgcaaaatctgaacaagtag

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