Xiphophorus hellerii (green swordtail): 116725002
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Entry
116725002 CDS
T07363
Name
(RefSeq) syntaxin-2-like isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116725002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116725002
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116725002
Membrane trafficking [BR:
xhe04131
]
SNARE
Syntaxin (Qa)
Stx-PM
116725002
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
116725002
Exosomal proteins of other body fluids (saliva and urine)
116725002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
Syntaxin_2
Phage_TAC_4
SNARE
Motif
Other DBs
NCBI-GeneID:
116725002
NCBI-ProteinID:
XP_032426723
LinkDB
All DBs
Position
8:complement(11438064..11443545)
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AA seq
274 aa
AA seq
DB search
MSNSTAIGAEMEEFFKTVGEIRNLIEKISSQTEDMEKIHCCILSSSHKGSKDELELINNE
TRNNAKLVQTKLKLMQKNCSSEDNKTNNSVICRIRRNQHSHLTRWFSEVMKSYHKIQISF
REKCKAQIQRHLEIVDKVTTDDELEDMLQRDNLAIFVSNIHFDAQFSSRALSEIEGRHQD
IISLEYSIKELHEIFIDTAILLEMQGELINNIEKNVTSAGGDVHASKEETQKALEYKKNP
YKVVSLPSFFKSFRRQTNTKADDESSSEDCIKYS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcaacagcgataggagccgaaatggaggaattttttaaaacggtgggtgag
ataagaaacctcattgaaaaaatttccagccaaacagaggacatggaaaaaatacactgc
tgcatcctttcctcttcgcacaaaggaagtaaagatgaactggagctgataaacaacgag
accagaaacaacgccaagttggtccaaaccaaattaaaattaatgcagaagaactgttca
tcagaagacaacaaaactaataactctgtaatttgtcgaattcggaggaatcagcactca
cacctgactcgttggttttctgaagtcatgaagagttaccataagatacagatttccttc
agagagaaatgcaaggcccaaattcagagacacctcgagattgtggataaagtcacaaca
gatgacgagctggaggatatgctgcaacgtgataatcttgccattttcgtatctaatatc
cactttgatgcccaattttcaagtcgtgctctctctgagattgaaggacgtcatcaggac
atcatcagccttgagtacagcattaaagagctacatgagatatttatagacacagccatt
ctgttggaaatgcagggagagttaatcaacaatatagaaaagaatgtcaccagtgctgga
ggcgatgtacatgcatcaaaagaagaaacacaaaaagcacttgaatacaagaagaatcct
tataaggttgtatctctcccaagcttcttcaagtcttttaggagacaaaccaatactaaa
gctgatgatgaaagctcttctgaagactgcatcaagtattcctga
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