Xiphophorus hellerii (green swordtail): 116725575
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Entry
116725575 CDS
T07363
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116725575 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116725575 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116725575 (usp13)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116725575 (usp13)
Peptidases and inhibitors [BR:
xhe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116725575 (usp13)
Ubiquitin system [BR:
xhe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116725575 (usp13)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116725575 (usp13)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
116725575
NCBI-ProteinID:
XP_032427602
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Position
9:13136499..13170338
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AA seq
863 aa
AA seq
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MAADLGELLVPFMPTIRVPKTGDRVYKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKTTGAAGGAIPRRRNGKVFLDLELNRDFNGEDFEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETSYPLAVK
LDTITPDGADVYSFEEEEAVLDPHMSEHLSHFGIDMLQMQRRTENGHHTDNNPRPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYLSTVLQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVLNGHQQRGISPRMLRALV
SRGHPEFSSNRQQDGHEFFLHLINLVERNSAGSENPSDSFRFLVEERIQCCQTRRVRYTQ
RVDYCIQLPAPIEAATNREELLAYEARRKEAEENTRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLVMQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQAGEEELPDLMPPIVLPEDTRDNSMSSTDSPEIDEGAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPLPSTSDSPMGATPLDNLPPEESI
AILTSMGFPRNHSIRALKATNNNLERALDWIFTHPEEEESDGLSDMADTEPNDNAFSNMN
SHSDSTLSPDRETSGPRVKDGPGRYELFAIISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYRRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctggtccccttcatgcccaccatcagagtccccaaa
acaggagacagagtctacaagagcgagtgcgccttctccttcgactcccccgagtctgag
ggaggcctgtatgtgtgtatgaacacattcctgggcttcggacgggaacatgtggagaga
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacggcatgttaaagagaaa
accacaggtgctgccggaggtgccatccccagacgaagaaatggaaaagtgtttctagat
ttagagctaaaccgagattttaacggagaggactttgagtatgaggatgaggcaaagctc
gtcatttttccagaccacttcgagatccctttaccaaatattgaggagctgcccgctctg
gtgaccatagcctgtgatgcagtacttaacgcaccttcagcttacaagaaacaggagcct
gagtcttgggaggaggagatccaggtgtcaagacatgccagaagcctcagacagctggat
aatggagtccggatcccacccagtggctggaagtgtcagaaatgcgagatgagagagaac
ctgtggctgaacctgactgacggctcggttctttgtgggaagtggttctttgatggaagt
gggggcaacggtcacgctctggagcactacagagagaccagctacccactggctgttaaa
ctggacaccatcactccagacggagcagatgtttattcgtttgaggaggaagaggctgtt
ttggacccccacatgtcagagcacttgtcacactttgggatagacatgctccagatgcag
aggagaacagaaaatggacaccacacagacaataacccccgaccgcgagtcagtgagtgg
gaagtgatccaagagtcgggcatgaagctgaaggcggtgtttggttctggttacacaggc
atcaaaaacctgggaaacagctgctacctcagcacagtgctacaggtcctgttcagcatc
ccagatttccagaggatgtatgtaggtaaccttcagaggatatttgactattcgcccctg
gaccccacccaggatttcgccacacagatggctaaactgggacacgggctcctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaacac
aaggtattaaacgggcaccaacagaggggaatctctccccgaatgctcagggcactggtc
agcagggggcacccagagttttcctccaacagacaacaagatggccatgagttcttcctg
caccttatcaacttggtggaaagaaacagtgctggttcagagaacccaagcgactcgttt
cgtttcttggtggaggagagaattcagtgctgtcagactcggcgggttcgttacactcag
cgggtcgactactgcatccagctaccggctcccatagaagcagcgacaaacagagaggag
ttgcttgcatatgaggccaggcggaaagaagccgaggaaaacacgcgggctcctcctgaa
ccggtgcgagcacggatccctttcacagcctgtcttcaggcctttacagagcctgaaaac
gtccccgatttctggagttcagcattgcaggccaaatcagctggagtcaaaacttcccgc
tttgcctcattcccagagtatcttgttatgcagatcaagaaattcaccttcggtgttgac
tgggtgccaaagaagcttgacctggccatcgatgttccagacttcttggacctgagccgg
ctccgagccacagggctgcaggcgggcgaagaggagcttccggatctcatgcctcccatt
gttttaccggaagacaccagagataactccatgagctcaaccgactctccagagatagac
gaaggcgccgttatgcagctggcagagatgggttttccactggaggcctgcaggaaggct
gtgtactacacaggaaacatgggcccagagatggccttcaactggatcatagcccacatg
gaggagcctgactttgctgaacctctcactttgccctcaatgatggatcctcttccctct
accagtgacagccccatgggggcgacgccactggacaacttgcctcctgaggagagcatc
gccatcctcacctcgatgggctttcctcgcaatcacagcatccgcgctctcaaagccacg
aataataatcttgagcgagcgctcgactggatcttcacccacccagaggaggaggagagc
gacgggctctctgacatggcggacacggagcccaacgacaacgccttttccaacatgaac
tcgcacagcgactccacgctgtccccagacagagaaacgtcaggcccgagagtcaaagat
ggaccaggacgatatgagctgtttgccatcatcagccacatgggagcctccacaatgtct
ggacattatgtttgtcacatcaaaaaagagggaaggtgggtgatctacaacgaccacaaa
gtgtgtttgtcagaaaggcctccaaaggacttgggctacatctacttttaccgtcgcctc
tcgagcagttaa
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