Xiphophorus hellerii (green swordtail): 116726936
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Entry
116726936 CDS
T07363
Name
(RefSeq) protein KIAA0556 homolog isoform X1
KO
K22858
protein JBTS26
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116726936
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Other cilium assembly proteins
116726936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4457
Motif
Other DBs
NCBI-GeneID:
116726936
NCBI-ProteinID:
XP_032429778
LinkDB
All DBs
Position
10:1042871..1072933
Genome browser
AA seq
1564 aa
AA seq
DB search
MDNQGRKACREAELASAADETLDEYLIGLQQKNRALRRLRVKGRREVELERLEEGFSIYF
NGANAEASRRNSKASRTACSLPDQRAADVCRSAHQLAAHSGILGPETSRKRSQTAPERVR
RKEWVQESVEIRTEDGLRVKLSPDLRYSEDFEPYESVNMERSGQRSPCRDSSKLQRSFSC
RPEVQGGPANPEHSEKVLLSLEEVKVLRRSLEVSMRRSSRGSAGEESDEEWIEEQIEREE
STESLDELGLPLSKSSNSSRKSETSSPFDPADLIVLDFGPSHKGRKIERSLSARRRESSD
SFVPTRPLLVKSKTLDRPPSSWEGQRPRSRAERPLSAARKASAEERDSAQVFCSVRDAMQ
RENCSPGQGAGSHSTVEGHQEVNSVKPPGGHGKDDSGVSVAMQRITLLGPRQQQRLLKAL
EQLEAEPGQNPDLSKQPREPPPQPADVPPALYVTMEILSNWGNALQVGLTELQFFCRRNR
KLFVSPHDIDIRNADHPGNLAALVNGKVKTTRGRHMWTCPFHPPIQLYFIIRNTERALDF
GISSIKIWNYNRSLTDLDVGARHVRLYLNSSLVFDGQLEKGCGNQVFDYGSTVDLKAFLL
SSAGSAGRPLQAGEGGGAQPHRAVLPDPSDRTTLDAPLPPIAARRPSAQRSALDRSASAD
KADQAAPMQLTVTTQPSACRVAPQWLQPPNRAAPEGCEAGRERPRWLVPQLSTETKPSSS
SSSSMLPELPCNPGRVCRGADGPMNGGQRSLDPSCNLLEELQAERPVSGRRSSSRQTEEQ
RHLAADEPVCLVGAARRSSAGAGRSRCHSQQDDSLMESWDSLTKFNQCQRGRISNMAFEG
DVFDEFLQRRGHGPPTLPVTPATTPRTPPSSVSSAPQSDGPDDDPAVERDDDFEIPVLPQ
GRRLVLNIRSTWGDRHYVGLNGLEVFSASGEPLRPATISADPPDINVLPAYGKDPRVAAN
LVDGVNRTQDDMHLWLAPFTPGRRHSVFLDFAAPHQIAMIRVWNYNKSRIHSFRGAREVE
MLLDGRCIFRGEIAKASGTLSGDLDQFGDTILFTTDDAILEAMSRHDETFLGEDERPDGS
ACEEELQRPRTADGEGDERPFTQAGFREEDLALKLQLSAAVNQPEENMQNVPGIFSGKYL
RLEMTATWGDSHYMGLTGLEVVGKDGESLPLDLAMMVASPRDLNDLPEYQHDSRTLDKLI
DGHNITTDDLHMWLIPFSAGESHTLSVAFSRQQAVAGLRVWNYNKSSEDSYRGVKVLHLF
LDEVAISPPDGFLVRKGPGNCHFDFAQEILFVDFLQPPADTWSHDDDAQRHAAQRGSSKR
PDQPSMDYEAPIMPCGFIFQLQLLTAWADPYYIGLNGLEFYNQNHQKIHLTDNNIAAFPD
SVNILDNVSGDVRTPDKLIDGVNDTQDGRHMWLAPVLPGTVNRVYVIFDQPVTVSMIKLW
NYSKTPQRGVKEFGLLVDDLLVYNGVLDCVSQAARGILPTCDPVVPYHTVLFTDDAYISQ
RERSTVISPRSSRHNQRNHVEDQDVKMTNENQIVHHNKKKQTADPALRPKTCMTDGVKHG
KRRF
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggataaccaggggagaaaagcgtgccgagaggcggagctggcctctgctgcggatgaa
actctggatgaatatttaatcggcctccagcagaaaaacagagctctgcggcgcctcagg
gtgaaaggtcggcgggaggtggagctggagcggctggaggaaggattttccatttacttt
aatggagcgaacgccgaggcgagtcggaggaacagcaaggcttccagaaccgcctgctct
ctgccggaccagagggctgcagacgtctgcaggagcgcccaccagctagccgcgcacagc
gggattctgggacctgagacgagccggaagaggagtcagacggcgccggaacgcgtccgc
aggaaggaatgggtgcaggaatctgttgagatccggacagaggacggcctgagagtgaaa
ctctcccctgatttacgctactctgaggatttcgagccgtatgaaagcgtaaacatggag
aggtccggccagcgctcgccatgtagagattcctccaagcttcagcgctccttcagctgc
aggccggaggtccagggcggcccggccaacccggaacacagcgagaaggttctcctcagc
ctggaggaggtgaaggttttgcgtcggagcctggaggtcagcatgcggcggagcagccga
ggctcggcgggggaggagtcggacgaggagtggatcgaggagcagatagagagggaggag
agcaccgagagcctggatgagctcggcctgccgctctccaaatcctccaacagctcacgg
aagagcgagaccagcagtccgttcgaccctgccgacctcattgttctggactttggaccc
tcgcataaagggcgtaagattgagcgttctctgtctgcgaggaggagagaaagcagcgac
tcgtttgttcccaccaggccgttgttggtgaaaagcaaaacgttagacaggccgccttca
agctgggagggacagaggccgaggagtcgggcagagcggccgctgtcagcagccaggaag
gcttcagctgaggagcgagactcagcccaggttttctgcagcgtccgggacgccatgcag
agagagaactgcagccctgggcagggagccggcagccacagcacggttgaaggtcaccag
gaggtcaacagcgtgaagccccctggtggtcatgggaaggatgacagcggcgtctccgtg
gcgatgcagaggatcaccctgctgggccccaggcagcagcagaggctcctaaaggccctg
gagcagctggaagcagaacctggccagaacccagacctctccaagcagccgagagagccg
ccgccgcagccggcagacgtcccccctgcgctgtacgttaccatggagatcctgtccaac
tggggcaacgcgctgcaggtcggcctgacggagctgcagttcttctgccgcagaaacagg
aagctgttcgtgtcgccgcacgacatcgacatcaggaacgccgaccacccggggaacctg
gcggcgctggtcaacggaaaggtcaagaccaccagggggcgccacatgtggacgtgtccc
ttccacccgcccatccagctctacttcatcatcaggaacaccgagcgcgctctggacttc
ggcatctcctccattaaaatctggaactacaacagaagcctaaccgacctggacgtcggc
gcgcgccacgtccgtctgtacctgaacagttcgctggtgtttgacggccagctggagaaa
ggctgcgggaaccaggtcttcgactacggctccaccgtcgacctgaaggccttcctgttg
tccagcgccggctccgcggggcgccccctgcaggccggggagggcggcggcgcgcagccg
caccgtgcggttctgcctgacccgtcggacaggactacgttagacgcgccgctcccaccc
atcgccgctcgccgtccatctgcccagaggagcgccttggaccggtccgcctccgcggat
aaggcggatcaggcggcgcccatgcagctgacggtcaccacccagccgtccgcctgccgg
gtcgccccccagtggctgcagccgccgaaccgggctgctccagagggctgtgaggccggc
agggagcggccccgctggctggtaccgcagctctccacggaaaccaagccttcctcctcc
tcctcctcctccatgctgccggagctgccttgtaaccccggccgcgtgtgcagaggggcg
gacgggccgatgaacggcgggcagcgctccctggacccgagctgcaacctgctggaggag
ctgcaggcggagcggcccgtcagcgggcgccgcagctcctccaggcagacggaggagcag
cgccacctagcggccgatgaacctgtgtgtctggtcggcgctgcccggcggtccagcgcc
ggcgccggccggtcccgttgccacagccagcaggacgactccctgatggagtcctgggac
tccctcaccaagttcaaccagtgccagcgcggccgcatctccaacatggcctttgaaggc
gacgtcttcgacgagttcctccagcgccggggtcatggtccgcccacgctccccgtgacc
cccgccacgacccccagaacccctccgtcctccgtcagctcggcgccgcagagcgacggc
ccggacgacgacccagccgtggagcgagacgacgactttgagatcccggttctgcctcag
ggccggcggctggttctcaacatccggtccacttggggcgaccgccattacgtgggcctc
aacggcctggaggtgttcagcgccagcggcgagccgctgcgccccgccaccatcagcgcc
gacccgccggacatcaacgtgcttccggcatacggcaaagacccgcgcgtggcggccaac
ctggtggacggcgtgaaccgcacgcaggacgacatgcacctgtggctggcgccgttcacg
ccgggccgccgccactccgtcttcctggacttcgccgctccgcaccagatcgccatgatc
cgggtctggaactacaacaagtcgcgcatccactcgttccgcggcgccagggaggtggag
atgctgctggacggtcgctgcatcttcaggggcgagatcgccaaggcgtcgggaacgctg
tccggagacctggaccagttcggggacacaatcctcttcaccacagacgacgccatcttg
gaggccatgtctcgccacgacgagacgtttctgggcgaagacgagcgacccgacgggtcg
gcgtgtgaggaagagctgcagcggccgcgcaccgccgacggagagggtgacgagcgacct
ttcacccaggccgggttcagagaggaagacctggcactgaagcttcagctcagcgctgca
gtgaaccagccagaggaaaacatgcagaatgttcctgggatcttctctgggaaatacctc
agactggagatgacggcaacttggggcgattcccactacatgggcctgacggggctggag
gtggtggggaaggacggggagagtttacctctggacctcgccatgatggtggcgtcaccg
cgtgacctcaacgacctgccggagtaccaacacgactcgcgcacgcttgataagctcatc
gacggccataacatcaccactgacgacctccacatgtggctgattcctttctccgctgga
gaatctcacaccctgagcgtcgccttcagcaggcagcaagccgtcgccgggctgcgcgtc
tggaactacaacaagtcatctgaggattcctacagaggggtgaaagtccttcatctgttc
ttggatgaggtggccatctcccctccggacgggttcctggtccggaaaggaccgggtaac
tgccacttcgacttcgcccaggagattctgtttgtggatttcctgcagcctcccgctgac
acctggagccacgacgacgacgcccagaggcacgcagcacagagaggaagttcgaagagg
ccggaccagcccagcatggactacgaagctcccatcatgccttgtggcttcatcttccag
ctgcagctgctgaccgcctgggcagacccgtactacatcggcctgaacggactggagttt
tacaaccagaaccaccagaagatccacctcacggacaacaacatcgcagcttttcctgac
agcgtgaacatcctggacaacgtgagcggcgacgtccggactcccgataaactgatcgac
ggtgttaacgacacgcaggacggcaggcacatgtggttggccccggttctcccaggaacg
gtgaaccgtgtttacgtgatcttcgatcagccggtgaccgtgtccatgatcaagctgtgg
aactactccaagacgcctcagaggggcgtcaaggagttcgggctgctggtggacgacctc
ctggtgtataacggcgttctggactgcgtgagccaggccgccagaggcatcctgccgacc
tgtgaccccgtggtgccgtaccacaccgtcctgttcaccgacgacgcctacatatcgcaa
cgcgagaggagcaccgtcatcagcccccgaagcagcagacacaaccaacgcaaccatgtg
gaagaccaggatgtgaagatgaccaatgagaaccagatcgttcatcacaacaagaagaag
cagacagccgatcctgctctccggcccaaaacctgcatgactgatggcgttaaacacggg
aagaggcgattctga
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integrated database retrieval system
