Xiphophorus hellerii (green swordtail): 116727372
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Entry
116727372 CDS
T07363
Symbol
josd1
Name
(RefSeq) josephin-1
KO
K15235
josephin [EC:
3.4.19.12
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116727372 (josd1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116727372 (josd1)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116727372 (josd1)
Peptidases and inhibitors [BR:
xhe01002
]
Cysteine peptidases
Family C86
116727372 (josd1)
Ubiquitin system [BR:
xhe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
116727372 (josd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Josephin
Motif
Other DBs
NCBI-GeneID:
116727372
NCBI-ProteinID:
XP_032430655
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All DBs
Position
10:22678946..22689806
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AA seq
260 aa
AA seq
DB search
MGSTPHPASEWKEKGRGGLQELGCMPWKVSKQKAAGGGGEAVSGATERRSKDPRDGQLQQ
DLSSSSSSLSPPAPQQTSPTTPAIYHEKQRRELCALHALNNVFQDGTAFSRDTLQEIYQR
LCPSTMVTPHKKSMLGNGNYDVNVIMAALQTRGFEAVWWDKRRDVGSIELSNVEGFILNV
PSNLRWGPLRLPLKRQHWIGVREVGGAYYNLDSKLRNPQPIGSPDELRKFLRQQLRGKNC
ELLLVVSEEVEAHQTWRSDG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtactccgcatccagccagtgagtggaaggagaagggccgaggcgggctgcag
gagctgggctgcatgccctggaaggtcagcaagcagaaagctgccggaggagggggggaa
gcggtttcaggagcaacggagaggaggagcaaggatccgagggacggtcagctgcagcag
gatctctcgtcgtcgtcgtcctccctctccccgccggctccccagcagacttctccgaca
actccggccatatatcacgagaagcagcggagggagctgtgcgcattgcatgcgctcaac
aacgtcttccaggatgggacggcctttagtcgggacaccctgcaggagatctaccaaagg
ctatgtcccagcactatggtgacgcctcacaaaaaaagcatgctgggaaacgggaactat
gatgtaaacgtcatcatggcggcattgcagacccgagggtttgaggcagtctggtgggat
aaaagaagggatgtaggcagcattgagctgtccaacgtggagggctttatcctgaacgtg
ccgtccaatctgcgctgggggcccctccggctgccacttaaacgccagcactggattgga
gtcagggaggtgggaggtgcctactacaacctggattctaagctacgcaaccctcagcct
attggcagtcctgatgagctcaggaagtttctccgtcagcagctgcgagggaagaactgt
gaactcctgctggttgtctcagaagaggtggaggcccaccaaacgtggcgctccgatggc
tga
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