Xiphophorus hellerii (green swordtail): 116728307
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Entry
116728307 CDS
T07363
Symbol
robo3
Name
(RefSeq) roundabout homolog 3 isoform X1
KO
K06755
roundabout, axon guidance receptor 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116728307 (robo3)
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
ROBO family
116728307 (robo3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Sp38
fn3_4
Motif
Other DBs
NCBI-GeneID:
116728307
NCBI-ProteinID:
XP_032432199
LinkDB
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Position
11:complement(8631355..8814996)
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AA seq
1423 aa
AA seq
DB search
MLRYLIKTLLQMNLFTDTIRSPSNGTDVFFNESLASFNSSLLDWGNLTGSNGSRPRLEDA
APRVIEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDREDPRSHRMLLPSGS
LFFLRIVHGRRSKPDEGVYVCVARNYLGEAVSRNASLEVAILRDDFRQTPSDVVVAAGEP
AVMECIPPRGHPEPTISWKRNNIRVNDRDERITIRGGKLMISNTRKSDAGMYVCVGTNMV
GEKDSDPAELVVFERPVFTKQPVNQVVLADDTVEFFCEVHGDPTPTVRWRREEGELPRGR
FEIRSDNSLRLSQVRAEDEGTYTCVSENSVGKAEASGTLHVHVGHSFPPQIVVRPRDQIT
APGRTVTFLCGTKGNPPPAVFWQKEGSQILLFPIQEPSQSSRFSVSLSGELTIADVQVAD
SGYYICQAISVAGSILTKALLEVESAPSDRVPPIIRQGPGNHTLAPGSTAQLHCHVMGNP
IPSIQWEKDGQRILGNDGRVSLMENGTFQITRLQETDSGVYTCLASSSSGETSWSGVLTV
KESADTSVAQATEPFQLPGPPHKPIVTDVSKNSVSLTWQPNAHEGGAAVTSYIIEAFSQS
AGSTWQTVADMVKMETHTITGLLPNTVYLFIVRAVNAYGLSDPSPISEPVRTQDVSPTGQ
GVDHRQVQRELGEVAVQLQDPVMLTSTSIRVSWTVDRQSPYVQGYRLFYRPSGGTWLLQD
INSPSERSTVLTGMLKGTEYEIKIRPYFDEFQGKDSRTLLIRTREEVPSAPPRGVTVATV
KLSNSSSISVTWEPPPSNMQNGIIQEYRVWCVGSGGDNQTRYFVNRTVDGTTQSTVLKGL
IPGVLYQVEVAAVTGAGVGTRSHPVSVLIKLPAEEPTASGGGGGGNGEEGSVSLAEQITD
VVKQPAFIAGIGGACWVILMGFSLWIYCRRKKRKELSHYTASFAYTPAVGFPHAEASGLT
GRPGVLGGNMGNYPWLADSWPTTNLVHSSKEAVNCCTANHDPAERYYNEAGISNYLNQTE
KYSMGGSTEGPIYSTIDATSEDLHSFTYGQNVSTTPYATTSIMPFSSQPQGATFSGEQQD
EGHWITQPGPSQPAQYAQPDRCAGKPKQKAMGKAVKTPSLTWMEALPPPPPVGELDQCEQ
DGQLQHDDMDMGSDEEWCPPLPERTYLMEGCEDGPAPPQRNITSSPATSYSHQSTATLTP
SPHEEARAPADQQLARRRLPCGPVPVPQAPSPPLTQSNPSLCGQQLLGSTEAGTLQFQSP
AHCCLHGQAPAANEDGASTPVHSRSSPAETCTPPNQRSRVKKKASKTSAYRRDIQGDLPP
PPEPPPEENRLQGPQGCVETSSLANSALSSLERSDYSSNSHQRKGSGQKHADNEEVVAYS
GKSGYLSRSQMSGNCSTTGSSSSRGSTGSRGLGSARKHNEEMR
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctacctgatcaagaccctgctgcagatgaatttgttcaccgacaccatccgt
agcccatccaacggcaccgacgtgttcttcaacgagtctctggcttcctttaacagctcg
ctgcttgactggggaaacttgacaggctccaacggatctcgccccaggttggaggatgct
gctcctcgggtcatcgagcatccgtccgatttgatcgtgtccaagggagaaccggcgacc
ctcaactgcaaggctgaggggcggcccacgcccaccgtggagtggtacaaagacggcgag
cgggtggagacggatcgagaggaccctcgctcccaccgcatgctgctgcccagcggctcg
ctcttcttcctgcgaatcgtccacgggcggcgaagcaaaccggacgaaggcgtctacgtc
tgcgtggcgcgcaactacctgggcgaggccgtcagccgcaacgcgtcgctggaggtggcg
attctgagagatgacttccgtcagacacccagtgatgtggtggttgccgcaggcgagccc
gctgtcatggagtgcatcccacccagaggccatcctgaacccaccatctcctggaagaga
aacaacatccgagtcaacgatcgcgatgaaaggatcactatccgaggaggaaagctgatg
atttcaaacaccagaaagagtgacgctggcatgtatgtgtgcgtgggaacaaacatggtt
ggtgagaaagacagcgatccagcagaactcgtcgtatttgagaggcccgtcttcaccaaa
caaccagtgaaccaggtggtgttggctgacgatacggtggagttcttctgcgaggtacat
ggagatcccactccgactgtccgctggcggagggaagagggagagttgccccggggcagg
tttgagatccgcagcgacaacagtctccgtctgagccaggtgcgagctgaggacgagggc
acctacacctgtgtgtcagagaacagcgtgggcaaagcggaggcctctggaaccctccac
gtacacgttggccactcatttcctcctcagatcgtcgtccggccacgggaccagatcaca
gctccgggtcggaccgtaaccttcctctgtggcaccaagggaaaccctccgcctgcagtc
ttctggcaaaaagaaggcagccagatcctgctgttccccatccaggagccttctcagtca
agtcgtttctctgtgtctctgagcggcgagctcaccatcgctgacgtgcaagtggcagac
tctggctactacatctgccaggccatcagcgtggccggcagcatcctgactaaagccctg
ctggaggtggaaagtgcaccctcagacagggtccctcccatcatccgacaggggccaggc
aatcacactctagctcccggttcaaccgctcagctgcactgccacgtcatgggcaacccc
atccccagcattcaatgggagaaggatggccagaggattctgggaaacgacggacgagtc
agcctgatggaaaatggtacctttcaaatcacccgcctccaggaaacggattctggagtt
tacacctgcctggcttccagctccagcggagagacgagttggagtggcgtgctcacagtc
aaagagagcgccgacacgtcggtcgctcaggccaccgagcccttccagctgccgggcccg
ccccacaagcccatcgtcacagatgtgtccaagaacagcgtctctctgacctggcaaccc
aacgctcacgagggcggagctgctgtcacctcctacatcattgaggccttcagtcaatca
gcaggcagcacatggcagactgtagcagacatggtgaagatggaaacacacaccatcaca
ggccttcttcccaacaccgtctacctgttcatcgtccgagcggtcaacgcctacggcctg
agcgaccccagccccatctctgagccggtcaggacgcaggacgtgagtcccacgggtcaa
ggggtggaccaccggcaggtgcagagagagctgggagaggtggctgtccagctgcaggac
cccgtcatgctcacttcgacctccatccgagtgtcctggacggtggaccgccagtctcca
tacgtccagggctaccgcctgttctaccgccccagtgggggaacctggctcctccaggac
atcaactcaccctcagagcgcagcactgtcctcacgggcatgctcaaaggaactgagtac
gagataaagatccgtccgtacttcgacgaattccagggcaaggacagccgaacgctgctg
atccgaactcgagaagaagtccccagtgcgccgcccagaggagttacagtggcaacagtg
aagctcagcaacagttccagcatcagcgtcacctgggagcctccacccagcaacatgcag
aacggcatcatccaggagtaccgggtttggtgcgtgggcagcggcggtgataaccagacg
cgctacttcgtcaaccggacagtggacgggaccacgcagtccacagtgctgaagggcctc
attcccggcgtgctctaccaggtggaggtggcggcggtgacgggcgctggcgttggcact
cgcagtcatccggtgtctgttctcatcaagctgccagctgaagagccgactgcgtcaggc
ggcggcggcggtgggaacggcgaagagggcagcgtgagcctggccgagcagatcactgat
gtggtcaagcagccggcgttcatcgcgggcatcggcggcgcctgctgggtcatcctcatg
ggcttcagcctgtggatctactgccgccgcaagaagaggaaggagctgagccactacacg
gcgtccttcgcctacacaccggcagtggggttccctcatgctgaggcatcaggactcact
ggaaggcctggcgtgttggggggcaacatgggcaactacccgtggctggcagactcctgg
cccaccaccaacctggtccacagcagcaaggaggccgtcaactgctgcacggccaatcac
gacccagctgagagatactacaacgaagctgggatctccaactatctgaatcagacggag
aagtacagcatggggggttccacggagggtcccatctacagcaccatcgatgccaccagc
gaggacctgcacagcttcacctacggccagaatgtctccaccaccccttacgccaccacc
tccatcatgcccttctccagtcagccacagggggcaacgtttagcggggagcagcaggac
gaagggcactggatcacccagcccggcccgtcccagcctgctcagtacgcacagccggat
cgctgcgctggtaagcccaagcagaaggcgatggggaaggcggtgaagaccccgtctctg
acgtggatggaggctttgcccccgcctccaccagttggcgagctggaccagtgtgagcaa
gacggccagctccagcatgacgacatggacatggggtcggacgaggagtggtgtccgccc
cttcctgagaggacgtacctgatggaaggctgcgaggacggccccgctccccctcagagg
aacatcacgtcctcgccagccacctcctacagccaccagtccaccgctaccctgactcct
tcgccccacgaggaagccagagcccccgctgaccagcagctggcacgcagaaggttaccc
tgcggtccagttccagttccccaggcaccaagcccgccactcacccagtccaaccccagc
ctctgcggccaacagcttctcggctcaacagaggctggcacgctgcagttccaaagtccc
gcccactgctgccttcatggccaggcgccggcagcgaatgaagacggcgcatctacgcct
gtgcacagccgctcctctccagcagaaacctgcactcctcccaaccaaaggtccagagtg
aagaaaaaggcgtccaagacctcagcgtacagaagagatattcaaggagacctgccccca
cctccggagccccccccagaggagaacaggcttcagggcccccaggggtgtgtggagacc
agcagcttggcaaacagcgccctgtcctccctggagaggagcgactacagcagcaacagc
caccagcggaaaggctcgggacaaaaacatgcagacaatgaggaagtggtggcgtacagc
ggtaagagcggctacctctccaggagtcagatgtccggtaactgctcgaccacggggagc
tcctcttccagaggctccaccggctctcgggggctcggctcagccaggaaacacaacgag
gaaatgagataa
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