Xiphophorus hellerii (green swordtail): 116728968
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Entry
116728968 CDS
T07363
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B
KO
K16482
centriolar protein POC1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116728968 (poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116728968 (poc1b)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116728968 (poc1b)
Cilium and associated proteins [BR:
xhe03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116728968 (poc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
WD40_like
DUF948
Motif
Other DBs
NCBI-GeneID:
116728968
NCBI-ProteinID:
XP_032433220
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All DBs
Position
2:28370883..28415764
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AA seq
506 aa
AA seq
DB search
MGSVLDDPSLERHFRGHKDVVTCADFNPNQNQLATGSVDRTLMIWNLAPKARAFRFVGHQ
DTVTGLQFSPSGRLLASSSKDRTVRLWTLSLKGESSVLKGHTGAVRSVSFSHDGYSLVTA
SDDKSVIVWSVPRRCYVYSLSQHTNWVRCARFSPDGRLIVSCGDDRTVRLWDTSTKCCIN
TFTNCGGSLTFVDFNSSGTCIASSGDDRCLKIWDLRTNKLIQHYQVHSGGINSFSFHPSN
NYLISGSSDRTVKILDLLEGRLIYTLHGHKGAVIAVAFSRLGDHFASGGTDCQVLLWRTN
FDRKRYRDVLLQHSQRSTPDPPPHLSDIHPRAPHAHLHRSQPTGIQINPVVTNMMSSDPQ
VVEVSRYLHDNKADFLARRVTGSRAEVWTRGESASRAGSTSGNQTGSDGPRRGKGKAEEE
DMAQTRPLNVLPGRPSSLDFTLQHIVRQLDVLTQTVSVLEERLTLTEDKMKECLQHQSQI
LKDLKTSGQRSRTASEEMDESIFHFT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgttctggatgatccgtctctagagagacacttcaggggacataaagatgtt
gtcacctgtgcagacttcaatccaaaccaaaaccagctggctacaggatcagtggataga
accctgatgatctggaacctggccccgaaggcgagggcctttcgttttgtcgggcaccag
gacaccgtcacggggctgcagttctccccatccgggcgtctgctggcttcttcgtccaaa
gacagaacggttcgattgtggacactttccttaaaaggagagtcttcggtgttgaaaggc
cacaccggcgcggtgcgcagtgtgtctttctcccatgatggctacagcctggtcactgcg
tctgatgacaagtcggttatagtgtggagcgtcccacggcggtgttacgtctactccctc
agccagcacactaactgggttcgctgtgccagattttctccagacgggaggctcatagtg
tcctgtggggacgaccgcaccgtccgtctctgggacacgtccaccaaatgctgcatcaac
actttcaccaactgcggaggctcgctcacgtttgtcgacttcaactccagcggcacctgc
atcgcctcgtccggagacgacaggtgtcttaaaatctgggatttgcgaaccaataagctg
attcagcactatcaagtccacagtggaggaatcaatagtttctccttccatccgtccaat
aactacctaatcagtggctccagtgaccggacggtgaagatcctggacctgctggagggc
cggctcatctataccctgcatggacacaagggagccgtaatcgctgtggccttttccagg
cttggagatcactttgcctcaggcggaactgattgccaggttctgctgtggaggacgaac
tttgaccgtaaacgttaccgggacgttctgctacaacacagccagaggtccacccccgat
cctccgccccacctgtctgacatccaccccagggcaccccacgcccacctccaccgctca
cagcccacgggcattcagatcaatccagtcgtgacaaacatgatgtcctctgatcctcag
gtcgtagaggtcagccgatatctccatgacaacaaggcagacttcctggcacgtcgtgtc
accggatcgagagcggaagtgtggacccgaggtgaaagtgccagcagggcggggtcgact
tctgggaaccagaccggctcagatggcccgagaagaggaaaaggaaaggcggaggaagag
gacatggcgcagacccgcccactgaacgttctccccggtcgtccatcaagtctggacttc
accctgcagcacattgttcgacagctggacgttctcacgcagaccgtttccgtgttggag
gagcgtctcaccctaacagaggacaagatgaaggagtgtctccagcatcagtctcagatc
ctgaaggacctgaagacatcgggacagagatccaggacggcgagcgaagagatggatgag
tccatttttcatttcacttaa
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