Xiphophorus hellerii (green swordtail): 116729195
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Entry
116729195 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 5B-like
KO
K20164
DENN domain-containing protein 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116729195
Membrane trafficking [BR:
xhe04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116729195
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
RUN
uDENN
dDENN
DUF2065
PLAT
Motif
Other DBs
NCBI-GeneID:
116729195
NCBI-ProteinID:
XP_032433462
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All DBs
Position
2:13719337..13737680
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AA seq
1284 aa
AA seq
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MNGTAAATGGSASCRFAHYFVVCGVDTETGLEPDDGAGESFEQSPIRRSFKSKVLVHYPE
NMDRNPFNKDAVNMLCLPRGLSFRTQADSLDPQFHSFTVTSDDGTRSYGFVHTFYEEVTS
PQIITAMQTLYQMHHVEHHSSSSASSPSSSTSSSASTPSTSSMDSLASSLEESDAESLTS
GVSGCLGCVGSFDAARDTLYVSKALCLITPLPFLQASRQFLAQLHQAVTSQMAPPLPLES
YVYNILYEVPLPPPGRSLRFHGVQGPIVCQRPGPGELPLGDYPLGEAFSLLGVDNMVKLL
TCALLETQVLLYSKDYQRLMMVAEGITTLLFPFQWQHIYLPIISTPLHHLLDAPVPFLMG
IQHRNGAQRSSLHLPHEANLCFVDIDSHCVEAPEDLPQFPDQTELIQELSEVLLSFGLPP
RGGVTATTTTGSTSSSPRLSSLVLEDLMEDRRNGNLGGEELAVLERLQALARRCGGGKVS
EGGKTLGHVFEEEEEELKAAKLNIQLREVFAVRFAAIFGRYEDFIVNSAMDLDSWLNNRD
GTCSFDKGSFLSVQPAAHLYFLSRFLETSMFSSFVDGKVVSRWVDREPLQQLFDGRMERE
RLYDISDEESRNRPYRKCTTLFESAQAIERRLLKTDHTAIHPHLLDMKIGQGRHHPGYFP
RLQADVLAQAHNTHKYSSRITASRRTEPRRSVADHSGTDSEPKQKHASTRRAFRQTKLLD
PSPQAVSLTHREFVDGLLSECRLKTKRMLKERMGKECVELGQGEANITGLQENTLIHGLC
DLLERTWGHGLQIKQGKSAIWSHLLHYQAAQDKMEAPADVPGSNSLDQRLSDDGPLLLRG
SLIQDMRFIQTMRDDLSEVGQARAWIHLALEKKMLSQHLKELLTNPELLRQLYKPHAFLL
CEEEREQFLYHLLSLNTVDYLCFTRTFTSISIPYRVVIIPMKKLSIAMATVNPWVCVSGE
LGDSGVRQIPKNAQEIFFQSKNLGRLSTLQLGVQENSGLLAKCLIDCVVVYNEITGHTYR
FPCGRWLGRGVGDGSLERVLIGQLVSPGAEEDAGRWSGTPPELASPSQSVRAVLGSLGGR
SRMHSAEVQEDLREAANNLVKHFHKPEQERGNLTVLLCGEGGLVLALEKFLLHGFRSNRL
FQRNVFVWDFVEKAVVSMETNDQMGDLHGSTLPKSPPCDSLCRYVHAINSSPRNIGKEGK
FQLFVCLGIRDKLLSQWFPLLAECPLTARTYEDGALLRDRAALHSLCRILQTLNDFSITL
EAGAGQRGSNSDPDAENTHPDEMR
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggactgcagctgccacgggcgggtcggcttcttgccgcttcgcccactacttt
gtcgtgtgtggagtggacactgagacgggcctggagccggacgatggagcgggtgagagc
ttcgaacaaagccccatccggcggtccttcaagtcaaaggttctggtgcattacccggag
aacatggacaggaaccccttcaacaaggacgctgtcaacatgctctgcctgcccagaggt
ctgtccttccgcacacaggcggacagcctcgacccgcagttccactctttcaccgtcacc
tctgacgacggaacgcgctcctacggcttcgttcacaccttctacgaggaggtgactagt
cctcagattatcaccgccatgcagactctctatcagatgcaccatgtggagcaccactcc
tcttcgtcagcctcctcgccttcttcctccacgtcctcctccgcttccacgccctccacc
tccagcatggactctctcgccagcagcttggaggagtcggacgcagagtctttgacgtct
ggagtttctggctgcctgggctgcgtgggctcctttgatgcagcgcgtgacaccctgtac
gtgtccaaagccctctgcctcatcacgccactcccgttcttgcaagcttcacgacagttt
ctggctcaactgcaccaggctgtgacatcccagatggctccacctcttcctctagagagc
tacgtctacaacattctgtacgaggtgcccctgcctccacccggacgctccctgaggttc
catggggtgcaggggcccatcgtgtgccagcggcccgggcctggggagcttcccctggga
gactatcctctgggagaggctttctctctgctgggtgtggacaatatggttaaactactt
acctgtgctctgctggaaacccaagtcctgctgtactcaaaagactaccagcgtttgatg
atggtggcagaaggcatcaccactttgctgttcccattccagtggcagcacatctacctg
cccatcatctctactcccctgcatcacctcctcgatgctccagtgcctttcctgatgggc
atccagcacagaaacggagctcagcgatcctcgcttcaccttccacatgaggccaatctg
tgttttgtggacattgacagccactgcgtggaagcgccggaggacctgccccagttccca
gatcagaccgagctcatacaggaactgagtgaggtgctgctaagttttgggctccctcca
cggggaggagtgacggcgacgaccaccacaggctccacatcgtcgtcgccacgcctgagt
agcctggtgctggaggacctgatggaggaccggaggaacgggaacctcggaggagaagag
ctggcggtgctggagcggctccaggctctggcgaggagatgcggaggaggaaaagtttca
gagggaggaaagacactgggacacgtgtttgaggaggaagaggaagagttgaaggctgca
aaattaaatattcagctgagggaggtgttcgccgttcgtttcgccgccatttttggcagg
tatgaggactttattgtcaacagcgctatggatttggactcgtggttgaacaatagagat
ggcacctgcagctttgacaagggttcattcctctcagttcagccagcagcccacttgtac
ttcttgtcccgattcctggagacctccatgttttcctcctttgttgatgggaaggttgtc
tcccgctgggtggacagagagccgctgcagcagctgtttgacggtcgcatggagcgagaa
cgactttacgacataagcgatgaggagtcccggaaccgtccttacaggaagtgcaccacg
ctctttgagtcagctcaggccatcgagcgcaggctgctgaagacggaccacacggccata
cacccccacctgctggacatgaagatcgggcagggccggcatcacccgggatatttcccc
agactgcaggccgacgtgcttgcacaggcacacaacacacacaagtattccagtcgcatc
acagcttcacgcaggactgaacccagaaggagtgttgctgatcactctggcaccgacagt
gaacctaaacagaaacacgcatccacaaggagagccttcagacagacgaaactcctcgac
ccgtcgcctcaagccgtctctctgactcacagagagtttgtcgatgggctcttgagtgag
tgtcgtctgaagactaagcggatgctgaaggagaggatggggaaagagtgtgtggagctg
ggtcagggagaagcaaacatcaccggccttcaggaaaacactctcatccacggtttgtgc
gatctgctggagaggacctggggccacggcctgcagatcaaacagggaaagtcggcaatc
tggtcccatctgctgcactaccaggctgctcaggacaagatggaagcacctgctgatgta
ccaggctctaacagcttggaccagaggctgtctgatgacggccctttgctcctgagaggg
tcgctaattcaggacatgaggtttatccaaaccatgagagacgatctgtctgaggtgggc
caggccagggcttggatccatctggctctggagaagaaaatgctgtcccaacacctgaaa
gagctgctgacgaacccggagctgctcaggcagctgtataagcctcatgcattcctgctc
tgtgaggaagagcgagaacagtttctgtaccacctgctctccctcaacactgtggactat
ctctgctttacccgcaccttcacctccatcagtattccgtaccgcgttgttataattccc
atgaagaagctgagcatcgccatggcaacagttaacccctgggtgtgcgtgtcgggagag
ctgggcgattcaggagttagacagatcccaaagaatgcacaggaaatctttttccagagt
aagaacctgggccggctcagcacgctgcagctgggagtgcaggagaactcgggtcttctg
gccaagtgcctgatcgactgcgtggtggtttacaacgagatcacaggtcacacctacaga
tttccgtgtggccgatggctggggagaggcgtgggtgacggcagcctggagagagtcctg
attggtcagctggtgtctcctggagcggaggaggacgctggacggtggtcgggaactcct
ccagagctggcgtctccgtctcagagcgtaagagcagtgctgggatcactcggcggccga
agcagaatgcactctgccgaggtacaggaggacctgagggaggcggccaacaaccttgtg
aaacattttcacaaacctgagcaggagagagggaacctgacagtgttgctatgcggtgaa
ggaggactggtcctggctttggagaagttcctcctccacgggttcaggtccaaccgtctt
ttccagaggaacgtatttgtttgggattttgtggaaaaagcagtggtttctatggaaact
aatgaccagatgggcgacctgcatggctcgacactaccgaagagtccgccttgtgactcg
ctgtgccgctacgtccacgccatcaattcttcccccaggaacattgggaaggaggggaaa
tttcagctgtttgtctgcctggggataagggacaaactcctgtctcagtggttccccctg
ctggccgagtgtcccctgacagctcggacgtatgaggacggcgctctgctgcgggaccgg
gccgccctgcattccctctgtcgcatcctgcaaaccctcaacgacttcagcatcaccctg
gaggcaggcgctggtcaaaggggttcgaactctgaccctgacgcggaaaacacgcaccct
gatgagatgagatga
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