Xiphophorus hellerii (green swordtail): 116729545
Help
Entry
116729545 CDS
T07363
Symbol
rnf10
Name
(RefSeq) RING finger protein 10
KO
K26979
E3 ubiquitin-protein ligase RNF10 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116729545 (rnf10)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116729545 (rnf10)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116729545 (rnf10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
116729545
NCBI-ProteinID:
XP_032434062
LinkDB
All DBs
Position
12:26316065..26325126
Genome browser
AA seq
783 aa
AA seq
DB search
MLESSAALCQKLGPNSAHCTETNMEKNPSSSTSNKVPPRSSSTGPPPGDSKPKTEGKNNG
GSKRYNRKREPSFPKAENFPGPRRTNSQKSKNFDKRPPQRGGGRQYGVMGGGRREEVAET
RRAEFSPAQFAGPKKISLNHLLNFTFEPRGGNDGVGDGGHSYWGRRNKWGHKNKPFNKEL
FLQANCQFVVTDDQDYKAHFTDPDTLVNWDCVQQVRIYSHEMPSCPICLYPPVAARITRC
GHIFCWPCMLHYLSLSDKSWSKCPICYEAVHTADLKSVVAMETKQYVVGDEITMRLMRRE
KGALVAMPSSQWVKVEEPVRFGDASLSQYSKLLLTSPSQVLNLVTEEKGILQAQLSLEEE
PEGCFIQSALCLLQEQEETLLKHQVANAETPDLSSLILNDPPSPLEEVVTTTISAKPVLQ
YSSAFDEEVAEFPEDTAAELPGCPDAIQESVLEEPAEAEPEPQLEEESPANQAESARPSA
AVVHGPYYYFYQADDCQQMFLHPINVRCLLREYGSLEACPDSITATVVEIVGHTVNEEIR
RRHRYLAHLPLTCEFSICELALQPPILSKETLDTFADDLEKRRRLRQKKARDEKRREKRI
EMEENKKQGKYPEVHIGLENLHHFPAFGSPPHYSSPPIQPDFTLAPPSPLSTSPSSDGTR
FPSLSVSSPTVGSVEDDSHCMSFAQMLKDGKARADAGLRVTPKKDKLLAPPAADSDGESD
GSDRVPVPSFQNSFSQAFEKALLQLDSGPPAPPQPVVEPDEKGGKKKKRKQKLLFSTSMV
HTK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgctagagagctcggcggctctctgccagaagctcggcccgaacagtgctcactgcacg
gagacaaacatggagaaaaaccccagcagcagcaccagcaacaaggttccgccccgttcc
agctccacaggcccgccgcctggagactctaagcccaaaacagaaggtaaaaataatggg
ggctctaagcgctacaaccggaagcgagagccctcctttcccaaagctgaaaatttcccc
ggccctcgccgcaccaattcacagaaaagcaagaatttcgacaagagacctcctcagaga
ggcggaggacgacagtatggagtcatgggcggaggacgacgtgaggaggtagcagagacc
cgccgggccgagtttagcccggctcaatttgctggacccaaaaaaatcagcctgaatcac
ctgctaaatttcaccttcgagcctcgcggaggcaacgacggcgtcggagacggcggccac
tcctactggggccgcaggaacaagtggggccacaagaacaagcccttcaacaaggagctt
ttcctccaggccaactgccagtttgtggtgactgatgaccaggactacaaggctcacttc
actgacccagacactctggtcaactgggactgtgtacagcaagtgcgcatctacagccat
gagatgccgtcttgccccatctgcctctaccctcctgtggcggctcgcatcacacggtgc
ggacacatcttctgctggccgtgcatgctccactacttgtctcttagcgacaagagctgg
tccaagtgccccatctgctacgaggccgtgcacaccgctgacctgaagagtgtggttgcc
atggaaaccaagcagtatgtggttggggacgaaatcaccatgcgtctgatgcggagagaa
aagggggctctggtggctatgccaagctcccagtgggtgaaggtggaggagcctgtccgc
tttggagatgcttctttgagtcagtattccaagctgctgctgacgtccccgtcgcaggtc
ctgaatttggtaaccgaggagaagggaatcctccaggctcagctgagcctggaggaggaa
cctgagggctgcttcatccagagcgccctctgtcttttgcaggaacaagaggaaactctg
ctgaagcatcaagtggctaatgcagaaacccctgacctgtcctcactgattctgaacgat
cctccttcccctctggaggaggtggtgaccactaccatcagcgcaaagcctgtgctgcag
tactcctcagcgtttgacgaagaggtggcagagttcccagaggacacagctgcagagctg
ccaggctgtcccgacgccatccaggagagcgtcctggaggagcccgccgaggctgagcca
gagccccagctggaggaagagagcccagccaatcaggcggagtccgctcgcccctctgct
gctgtggtgcacggaccgtactactatttctaccaagctgacgactgccagcagatgttc
ctgcatcccatcaacgtgcgctgccttctgcgtgaatacggcagcttggaggcttgtccc
gactccatcaccgccacagtggtggagatagtaggacacacagtcaatgaggagatccgt
cgtcggcatcgctatctggctcacctgccgctcacctgcgaattcagcatctgcgagttg
gccctgcagccgccgatcctgtccaaagaaactctggacacgtttgctgatgacttggag
aagagaaggcgcctgaggcagaagaaggcgagggatgaaaaacgcagggagaagcgcatt
gaaatggaggagaacaagaagcaggggaaatatcccgaggtacatattggactggagaac
cttcatcatttcccggcatttggctccccgccccactacagcagcccaccaatccaaccc
gattttactttagctcctccatcccccctcagcaccagcccttcctctgatgggactaga
ttcccgagtctgagtgtgtcttcgcccactgtgggtagcgtggaggacgattcccactgc
atgtcctttgcacagatgctgaaagatgggaaagccagagctgatgctgggctcagggtc
actccaaagaaagacaagctgcttgcccccccagcggcagacagcgacggtgagagcgac
ggctcggatcgcgttcccgtgcccagcttccagaattccttcagtcaggctttcgagaag
gcccttctgcagctggacagcggtccccctgccccgccacagcctgtggtagaacccgat
gaaaagggagggaagaagaaaaagaggaaacagaaacttctcttcagcacatccatggtt
cacacaaagtag
DBGET
integrated database retrieval system