Xiphophorus hellerii (green swordtail): 116729789
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Entry
116729789 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116729789
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116729789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
Prok-RING_4
U-box
MFAP1
hSH3
Motif
Other DBs
NCBI-GeneID:
116729789
NCBI-ProteinID:
XP_032434463
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Position
12:7807334..7811172
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AA seq
553 aa
AA seq
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MAQKGVQLDRENFSCSVCLDILKDPVMIPCGHSYCLKCIKNVWDEKNKKGVYSCPQCRQT
FTPRPVLVKNIMLAGLTEQLTGLGASLTEQSYAGPEDVACDICTGRKLKAIKSCLMCLVS
YCEKHLQPHYDVAQLKKHQLVQPSKQLHDNICSHHDEVMKMFCRTDQQTICYVCMVDEHK
GHDVVSAAAERKEKQKDLEVKRGEIQQTIQDGERDMKLLQQEVDTINDCANKAVENNDGI
FSEVMRLIQKKSCEVKQQIRSQQESEVSRVRDLQEKLEQEISELKRKDAELEQLSHTEDR
IQFLQKYPSLSAFSETKHSSSIDVRPPRYFEDVTAALSKLRDELQDILKEKWTNISLKVT
EVDFPLSEPRTRDDFLQYSQEITLDPNTAQMNLLLSEGNRKVTLVKQSQFYPDHPERLSV
KFQILSKQSLSQRCYWEVQWGGQGGRGSYVAVAYKDVYKTDSVFGQNDKSWSLFCCPNNH
QFWYNSIRTSIPGSEFSRVGVYLDQPAGTLSFYNVSENMTLIHRVQTSFTQPLYAGIQLW
FSIGDTAEICKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagtccagctggaccgagagaatttctcctgttcagtttgtctggat
atactgaaagatccggtgatgattccctgcggacacagctactgcctgaagtgtatcaaa
aacgtctgggatgaaaagaacaagaaaggcgtctacagctgtcctcagtgcaggcagacc
ttcacaccaaggcctgtcctggtgaaaaacatcatgttggcaggattaactgagcagctg
actggactcggagcttctcttactgaacagagttatgctggacctgaagatgtggcctgt
gatatttgtactgggaggaaactaaaagctataaagtcgtgtttgatgtgtttggtgtct
tattgtgagaaacacctgcagcctcattacgacgtggctcagttaaagaagcaccagctg
gtgcagccctccaagcagctccatgacaacatctgctcccatcacgatgaggtgatgaag
atgttctgccgcaccgaccagcagaccatctgttacgtctgcatggtggatgaacataaa
ggtcacgacgtggtttcggctgcagcagagaggaaggagaagcagaaagatctggaggtg
aagagaggagaaatccagcagacaattcaagatggagagagagacatgaagctgcttcag
caggaagtggacaccattaacgactgtgctaataaagcagtggagaacaatgacggtatc
ttctctgaggtgatgcgtctcattcagaaaaaaagctgtgaggtgaagcagcagatcaga
tcccagcaggaatctgaggtgagtcgagtcagagatcttcaggagaagctggagcaggag
atctctgagctgaagaggaaagatgctgagctggagcagctctcacatacagaggatcgc
atccagtttctgcagaaatacccctccctgtctgcttttagtgagaccaaacactcatcc
agcatcgatgttcgtcctcctaggtattttgaagatgtgacagcagccttgtcaaagctg
agagatgaactgcaggacatcctgaaggagaaatggacaaacatctcattgaaagtcact
gaggtggattttccactgtcagaaccaagaaccagagatgacttcctacaatattcacag
gaaatcaccttggatccaaacacagctcagatgaacctcctactgtctgaggggaacagg
aaggtgacccttgtgaaacaaagtcagttctatcccgatcacccagagcggttgtcagtt
aagttccagatcctgagtaaacagagtttgtctcagcgatgttactgggaggtgcagtgg
ggaggacaaggaggacgaggaagttatgtggcagtcgcatacaaggatgtctataaaaca
gacagtgtgtttggacaaaatgacaaatcctggtctttattttgttgcccaaacaatcat
caattttggtacaacagcatccgaacttccatccctggttctgagttctccagagttgga
gtttacctggaccaaccagctggtactctgtcgttctacaacgtctcagagaacatgact
cttatccacagagtccagaccagcttcactcagccgctctacgctggaatacaactctgg
ttcagcataggagacacagccgagatctgtaaactgaaataa
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