Xiphophorus hellerii (green swordtail): 116730396 Help Entry 116730396         CDS       T07363                                  Symbol dmxl1 Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe04142   Lysosome Brite KEGG Orthology (KO) [BR:xhe00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     116730396 (dmxl1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:xhe04131]     116730396 (dmxl1) Membrane trafficking [BR:xhe04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     116730396 (dmxl1)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     116730396 (dmxl1)    RAVE complex     116730396 (dmxl1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 NBCH_WD40 Motif Other DBs NCBI-GeneID:  116730396 NCBI-ProteinID:  XP_032435465 LinkDB All DBs Position 12:11042137..11112052 Genome browser AA seq 3092 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVVLGSNFERLQIIPGAKHGNIQV GCVNCSQRGGQIAASYGSIVCVFEPVHLPDQKYTSSKPSCQWQKTGQFVLESMVRNLAWH PTGDTLLTGSSSLQLWSNTDGKDESEEKGKQTKPTRPDCNSTWRCIWQSKTASPVNFIKF SPDGQFFATAGQDDCLVKVWYSTNKWKSCVAELFTPPDASVSEQGELNFSFIYLAHPRSV TGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRMWAETLLPGDSLISGYHSSHLFGPQGETV NSAGSSSKHTCNGKSAGMSSQELSFQESWHSSSYRDIPQPSLTGCLPHDQNQHHNHRRSS NSGTPHANALCHFHIAASINPATDIPLLPSISALSAVDDEEPGGLFTVHWLNNKELHFTL AMEVFLQQLGGSLEQRNESSNEELDDEENSDEEENRPSDPQGPEGGELPVAAVEHQVDVL LEEWNKGADMLFSIHPLDGSLLVWHVDWLDEYQPGMFRQTQVSFVSRIPVAFPTGDAISL SHSVVMYACNKNVDLAIQHGRQRPPGSSLSQTKSALISYGSLGKAAPSSSLRLSIFTPNV LMISKHDDGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSH HNALRTPEADSILAPAEAYSTGVPSFSHGSRPSRVSLGGVSQDPNAIYSELILWRVDPVG PLSLSGGVSELARINSLHASAFANVAWLPTLIPSSCLGMYCNSPSACFVASDGQSLRLYQ AVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHVFE EDLILGSMKTEDTQDTPQSPSTAACSKPAFSGHFFLVVVELTPTGRSLLHMWHLHLVACP VTIEEATIQKEINAASPITGSQFIFDIPSSPVQKSKPCTSNLQSACRLSLTTHMLCSQEM ALPQGVEVISVTPSAGHLSASCSLPSGRVPYLLATSCSDEKVRFWRCTALKTDPSSVHSL VYQWEEWPLVVEETHPNSSTVSVPGRPIKVSCCHSGRIAVAYRQTTNPPLNSTPHLNTHR LLQSPPALASSPFCSNTHMTSTLTLQPCQSLALSPNSANMKEPAVHISTFQCESTGGSQW ILEQTIALESTDPTTFSSTCNGPANIPNNTDFSTLNGNCPGSANRSQVHLDWVSQEDGSH ILTVGIGTKIYMYGRLSGKPPDLGLSSETNRDQSLSRLVLLRSVNLVSSVEGSLPIPVSL SWVRDGILVVGMDCEMHVYSQWQPPVPPKPSVTVVQDADISSSVSSIVSAVRQCQEDVFT TGAPTAFLTLPKRSLTRSMMSLAQKLSGKKTVYDLPVEMEDSGLFEAAHQLSPTLPQYHP VQLLELLDLGKVNRAKAILSHLVKCIAGEIVILKDNATHPEKRVRSRTISVGGSTARDQK IFNKSESSSPDYTEISSVPPLPLYALLAADEDAPHLEKGGSMSGDSGHGSSQTDAYDELF HTHNTLDLNPLDNEQEEPGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMS LMALADTIATTSTDLKDNQDKSKGGETLDECGLKFLLAVRLHTFLLTSLPPVHRAQLLRQ GLSTCQYAWAFHSEAEEELLNMLPALQKGEPTWAELRAMGVGWWLRSTNKLRRCIEKVAK ASFQRNNDPLDAAIFYLAMKKKAVVWGLYRSQKNTKMTEFFHNNFSEDRWRKAALKNAFS LLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETSSTYKKILQR HVLGQDKQIPVHPDPFLRSIAVWVLEGYSEALDTLIEQPTNCKSSGPSQSKCDSGSSTMS ASNPEVFNFYIYLRTHPLLLRRHFSSSDKAKVALTTEVRRADTISLDERRLFFTTAYAHL HTGCPMLALEVLSKMPKVHKHSKVSQHGVKDIPNELSVGSRNGPASEPDWSPPGLNGYQS DGNSNSRSDSVLSFDWSQPSMTLPAEHLELKWDSDKDEEDEENVPENNIKTDNSMFQDRQ DSMLTIAETVKSEESEDGDDFIAPSEDIFLAHLKFTACLKIMSNELRTLSTGYELDGGKL RYQLCQWLEREVVAHQHVCSYKPSLPELSVSGDGPVSGLVEEEQPGSPHNDGQKSRRLWL QSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSLKSVVAVDSQPTSIPLL TACTVSVKTVVANPIVYLTNLTHDILHTINALDSPPHPDIVNNEIYVMHTLAASLSACIY QCLCDGHKYSHVNHFTGTVYQSVLLSQKQAVKTVSLGEAVQPNTSPAQWPGIPSLIRLLS SAGEETQPGLAVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNCKLWMTVFGGGAR VPVMDKASSPARTPPPTSPSGLDRKPRRFRVLSSRSGSREESGIDREGPSSPKIVVEQEA TSIFKEDFVPPDLSIWDYFIAKPELPPSQNRVEYDSEESQDSQDEDDEDLEFEDVFEPNL PAKEHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVASPLCHAVLKTLQRWE QVLQKRLELFGGPPPKYISTHLHDEILTPGPALLRHKALFEPSNTPFRNNHHSVLPVKRL WQYLVKQEEVQETFIRNIFTKKPGTNQSVEDHTDSMKYSGVEEAGNSQTESDLGCPGGKA RIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDEDEVESKGVGG DDFLVVHARDDFGSLHGTTPYTHSSPGTPINVPWLGGHQTGRGAAVMIKRNINNVRRMTS HPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGGLS LWQTNTSGSTLKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPANS LVHAFCCHDSGATVLSMVQRRQLLLTGGRKGWITILELPHRHQRQSFQAHDSPVKALAVD PTEDCFISGSAEGNIKVWSLATQGLLYHFPNEHARQSLFRNLGTGVMQIEVGPTSHIFSC GADGTMKMRTLPNRFAAAQSSSTPKSDVKFFI NT seq 9279 nt NT seq  +upstreamnt  +downstreamnt atgaatctccatcaagtccttacaggggccgttaaccccggggacaattgcttctctgtt gggagtgtcaacaatgtgcctttcacggcttatgcgtcaggttgtgacgtggtggtttta ggaagtaattttgagcggctgcagatcatcccgggggccaaacatgggaatatccaggtc ggttgtgtcaactgctcacaacgaggtggacagattgcagcttcctatggaagcattgtt tgtgtctttgagccagttcacctcccagatcaaaagtacacatcatctaaaccaagctgc caatggcagaagactggtcagtttgttttagagtcaatggtacgaaacctggcttggcat cccacaggtgatactctgttaactggctctagtagccttcagttgtggtccaatactgat gggaaagatgaaagtgaagaaaagggaaagcagacaaaacccaccagaccagactgtaat tctacctggagatgcatctggcagagcaagactgcctctccagtcaattttataaagttc tcacctgatggacagttctttgctactgcaggacaggatgactgtctagtgaaggtttgg tacagcacaaacaagtggaagtcatgtgttgcggagctgtttactcctccagacgccagt gtgagtgagcagggagagctgaacttttccttcatctacttggcccatcctcgctccgtt acggggttctcctggaggaagactagcaagtacatgccacgaggggcagtgtgtaacgtt ctgctcacctgctgtaaggacagcgtctgccggatgtgggcagagacgctgttgccaggt gacagcctcatctccggttaccatagcagccatctttttggcccacaaggggaaacagtc aactctgctggctcctcttcaaagcacacctgcaatggaaaatcagcaggaatgtcttca caagaattaagttttcaggaatcatggcattcctcatcttaccgggatattcctcagccg tctctgactggctgcctgcctcacgatcagaaccaacaccataaccacaggaggagcagc aacagcgggacgcctcatgccaatgcgctctgccacttccatatcgcagccagcattaac ccagccacagacattcctctactgccttccatctctgctctgagtgcggtggacgacgag gaacccggtggtctgtttactgtccactggctcaacaacaaagagcttcacttcacgtta gccatggaagtcttcctgcagcaacttggaggaagtttggaacagaggaacgaatcctct aatgaagagcttgatgatgaagaaaactctgacgaagaagagaacagaccaagtgacccc caaggccctgaaggtggggagcttcctgtagcagctgtggagcatcaggtggacgttttg ttagaggagtggaataaaggggccgacatgctgttcagtattcacccgctggatggctct ttgttggtctggcatgtcgactggttagatgaataccagccaggcatgttcaggcaaact caggtgtcgtttgtgtctcgcatcccagtagcattccctacaggcgatgcaatctccctg agccacagtgtggtcatgtatgcctgcaacaagaatgtggatctggctattcaacatggc agacagcggccccccgggagctccttgtctcaaaccaaatctgctctgataagctacggg agtcttgggaaagctgctcccagcagtagcctcagactgagcattttcacccctaacgtc ctcatgatctccaagcacgacgacggctcgctgaatcagtgggcagtcagttttgcggag gactctgctttctccactgtgctcagcgtctctcacaaatcgcgctactgtggtcaccgt ttccacctcaatgacttggcctgtcactcgctgcttcctctcctcctcaccacctcgcac cacaacgccttgaggacgccagaggcagacagcatcctggctcctgcggaggcttactcg actggtgtcccctctttctctcatgggtcacgaccctcccgtgtgtccctcggaggggtt tcccaagatcccaatgccatctacagcgagctgattctgtggagggtggacccggtcggg ccgttgtctctatcaggcggggtgtcagagctggccaggatcaattccctccatgcgtca gcgtttgctaatgtagcctggcttcccaccctcattcccagcagctgcttaggtatgtac tgtaactcccccagtgcttgctttgtggcgagtgatggtcagtcactcaggctatatcag gctgttattgaggcgaagaaactcctgagtgaactctccaaccctgagatttctaaatat gttggggaggtgtttaacatcatcagccagcagtccacagcaaaaccaggctgcatcatt gagctggatgctattacagactttcaggggaaggagacccagctcctgcacgtttttgag gaggatctgatcctcggcagtatgaaaacagaagacacacaagatactccccagtctcca tctactgcagcctgcagtaagccagccttctcaggacatttttttctggtggtggtggaa ctgactcctactggtcgctccttgctccacatgtggcatctgcatctggtagcttgtcct gtcacaatagaggaagctacaattcaaaaagaaatcaatgcagcttctcctataaccggc tctcagttcatcttcgacatccccagctctccggtacagaagagtaaaccctgcacttcc aatttacagagcgcatgtcgtctcagcctgacaacgcacatgctgtgcagccaagaaatg gctctaccgcaaggggtggaagtcattagcgttactccttcagcaggtcatctgagtgca tcatgttctctgccgtcgggtcgtgtgccttatctccttgctacttcctgttctgatgaa aaggtgcgcttctggaggtgtactgctttgaaaacggacccgtccagtgtacacagcttg gtgtatcagtgggaagagtggcccctggtggtggaggagactcatccgaacagcagcacc gtgagcgtgcctggtcggcccatcaaggtcagctgttgtcactctggacggattgctgtt gcctacaggcagacgacgaacccaccactgaactcaacacctcatctgaacactcacaga ctgctgcagtccccgcctgccctggcatcctcccccttctgcagcaacactcacatgacc tcgacccttactctacagccttgtcaaagtctcgcgttaagccccaactcagccaacatg aaggaaccagcagtccatatcagcacctttcagtgtgagtccactggcggttcacagtgg atactggagcaaactatagccctggaaagcacagatcccacaactttttcttccacctgc aatggacctgccaatattccaaataacacagacttctctacactaaacggaaactgtcct ggttctgctaatagaagccaggttcacttggactgggtttcccaagaggacgggtcacac atattgactgttggcattgggacaaagatttatatgtatggccgtctctctgggaagcct ccagacttaggcctgtcttctgaaacaaatagagaccaaagtctgtctcgtctggttctc cttcggtccgttaatctggtttcctctgttgaaggttcgttacctatcccagtttcactg tcctgggttcgagatgggatcttggtggtgggcatggactgtgagatgcacgtttattcc cagtggcaaccaccagttcctcccaaacccagcgttacggtcgtccaagatgcagatatc agcagcagcgtctcctctatagtctcagctgtcagacagtgccaagaggacgttttcacc actggtgctcccacagcttttttgaccctacccaagcgatccctaacaagatcaatgatg agcctggcgcagaaacttagtgggaagaaaaccgtttatgaccttcctgtagagatggaa gactccggactctttgaagcggctcaccaactttctcctactctgcctcaataccatcct gttcagttactggagcttttggatctggggaaggttaaccgtgccaaagcaatcctctct cacttggtaaaatgcattgctggggaaattgtgatacttaaggacaatgccacccatcca gagaaacgcgtgcgctctcggactatcagtgtgggagggagcacagccagggaccaaaag atattcaacaagtcagaaagctccagccctgactacaccgagataagctctgtccctccc ctgcctctgtacgctctgctggcagctgatgaggatgcaccacatcttgagaaaggaggc agtatgagcggtgatagcggacatggctccagtcagactgatgcctatgatgagctcttt catacacacaacactctcgatctcaatcctctggacaacgaacaggaagaacctgggaat aaggttatagatctttcccagtacagtcctacatactttgggccagagcatgctcaggtt ctgtccagccacctcctccactccagtttgcctggattaacccgaatggagcagatgtcc ctcatggcgttggctgacacaatcgccacgacaagcacagacctcaaggataaccaggat aagagcaaaggtggagaaacactggatgagtgtgggttgaagttcttgctggctgtcaga ctccataccttccttctaacatccctgcctcctgtccatcgagcccagctgctacggcaa ggcctttcaacctgtcagtatgcctgggccttccactctgaagctgaggaggagctcttg aacatgctgcccgccctgcagaagggagagcccacctgggctgagctccgagccatgggt gtgggctggtggctgcgcagcaccaacaagctgcgcaggtgtatagagaaggttgctaag gcttcgtttcagagaaacaatgatcctctggatgctgctatattttacctcgcaatgaaa aaaaaggcagtggtttggggactgtacaggtctcagaagaatacaaaaatgacagagttt ttccacaacaacttcagcgaggacaggtggaggaaagctgcattgaagaacgccttctct ctgttgggaaagcagcggttccagcattctgccgccttctttctgctggctggttccctt aaagatgctgtggaggtgtgtttagagaaaatgcaggacttgcagctggccttggtgatc tctagattgtatgaatctgagtttgagacatcttctacttataaaaagatcctccagaga catgttttgggtcaagacaaacagattccagtccatccagatccattcctgcgaagcata gctgtctgggtcctggaaggttacagcgaagcattagacacactgattgagcagcctaca aactgcaaaagctctggaccctctcagagcaaatgtgacagtggttcctcaaccatgtct gcaagtaaccctgaggttttcaacttttacatctacctccgcacacacccgctgctcctt cgccgccatttcagctcttcagacaaagctaaagttgctctgaccacagaagtccgcagg gccgacaccatcagcctggatgagaggagactcttcttcacgactgcatacgcacacctc cacaccggatgccccatgttagcactggaagtcctttccaaaatgcccaaagttcacaag cactccaaagtttcccaacacggagtaaaagacattccgaatgaactgagcgtcgggagc aggaatgggccggcatcggaacccgactggtctccgccgggcctgaacggctaccagtcg gatggaaacagcaacagcaggtccgattcggtgttgagttttgattggagccagccgtcg atgacgctaccagctgagcatctggagctgaagtgggacagcgacaaagatgaagaggac gaagagaacgttccggaaaacaatataaaaacagacaacagcatgtttcaggaccgacag gactccatgttgactatagcagaaactgtaaaaagcgaggaaagtgaagacggcgatgac ttcattgctccatctgaagacatctttttggcccatcttaagttcaccgcttgcttgaag atcatgagcaacgagcttcggactctgtcgacgggatacgaactggatggagggaagctg cggtaccagctctgtcagtggttggagagagaggttgtggctcaccagcatgtttgcagc tataagccttccttaccagaactgtccgtctcgggtgatggccctgtttctggcctggtg gaggaggaacagcctggcagcccccacaatgatggccagaagagcaggaggctctggctc cagagcaaccagccgttactgaggatgtttctgagctactgcagcttgcacggctcccat ggtggaggactggcttctgtacgcatggagctcatattactgcttcaagagtctcatcag gatgactccctcaagtctgtggtggcagtggattcccagcctacctctatcccgctgctc acggcctgtacggtcagtgtaaagacggtggtggccaaccccatcgtctatctgaccaat ctgacccacgacatcctgcataccatcaatgcactcgactctcctccacatccggatatc gttaacaacgagatctatgtgatgcataccttggctgcttccttgtctgcatgtatttat caatgtctttgtgacggacacaaatacagccatgtgaaccatttcaccgggactgtgtat cagagtgttttactgtctcagaagcaggcagtgaaaaccgtcagcttgggtgaagctgtt cagccaaatacttctcctgctcagtggcctggtatcccctctcttattcgcctgctgagc tctgcaggtgaggagacccagccgggtcttgctgtgctgctctgtgagatcctgacagca gtcttcctgagtctgtttgttcacggcatggccacacactccagcaacgagctgtttcgc atcgtggctcacccactcaactgcaagctttggatgactgtgtttggaggaggcgcccgt gtccctgtcatggataaagccagcagtccagcaagaactccgcctccaacctccccaagt gggttggaccggaaaccacgacgattcagggttctgtcatcccgcagtggatccagggaa gagtctggaatcgaccgtgaaggaccttccagtcctaagatcgtagtggaacaggaagcg acttccatttttaaagaggattttgttcctccagatctcagtatttgggattatttcatt gccaagcctgagctgccaccatcacaaaacagagttgagtatgactcagaggagagccaa gacagccaggatgaagatgatgaagaccttgaatttgaagatgtgtttgagcccaacctg ccagcgaaagagcattcaaaccataattcatacagctggtgtttgatgcgcctggccatg gtacaactggtgttggtcaacctcaagtctttttacccgatggcaggatatgatttgtta gatttgcctgtggcctcgcctctgtgtcacgctgtgctgaagacgctgcagcgatgggag caggtgctgcaaaagcggctggagctgttcggcggccctccgcccaagtacatctccact caccttcacgatgagatcctaactcctggccccgcccttctcagacacaaagccctgttt gagccatccaacacccccttcagaaataaccaccactcagtactgccggtgaagcgttta tggcagtacttggtgaaacaggaagaggtgcaggagactttcattaggaacatcttcacc aagaaaccaggcacaaatcagtcggttgaggaccacactgacagtatgaaatattcagga gtggaggaggcaggaaacagtcagactgagtcagatctgggctgccccggaggcaaagca cgcatcatccacaaggaatctgacatcattacagcctttgccatcaacaaggcaaaccgt aattgtttagtcatggcctccacacatgacattcaggagctggatgtgtcatccatcttg gccacgcagatcttgacttggatcgatgaagatgaagtcgaatccaaaggtgttggtggt gatgacttcctggtggtccatgcgcgtgatgactttggttcgcttcacggcaccactcca tacacccacagcagccccggcacacccatcaatgtgccgtggcttggaggccaccagacc ggcagaggtgcagctgtgatgataaagagaaatatcaacaacgtgagaagaatgacctct catcccacactgccatactacctgacaggagctcaagacggaagcgtgaggatgttcgag tggggtcactctcagcagatcatctgcttcagaagtccaggcaactccagagtcaccagg atccgattcaaccaccaagggaacaagtttggtattgtagatgcagatggaggattaagt ctctggcaaaccaacaccagtgggagcacactcaaaccgtacctgacgttgcagtgccac aacaaaacagctcatgactttgtttttgttggctcttcttccctcatcgccaccgcaggt ctttcaacagacaacaggaatgtttgtctctgggacacactcgtcactcctgcaaacagc ctagttcatgctttctgctgccatgattccggcgccaccgtgctttcgatggtgcagcgg cggcagcttctcctcaccggcgggaggaaaggttggatcaccatcttggagcttccacat cgacaccagcggcagagtttccaggcccacgactcgccggttaaagcgctggctgtcgat cccactgaggactgcttcatcagcggatccgctgagggaaacattaaggtgtggagtctg gccacgcagggcctcctctaccacttccccaacgaacacgcccgccagtcgctgttcagg aacctggggacaggggtgatgcagatcgaggtgggtccgaccagccacatcttctcctgc ggcgccgacgggaccatgaagatgaggacgctccccaaccgcttcgccgcggcgcaaagc agcagcacccccaagagcgacgtcaagttcttcatctag

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