Xiphophorus hellerii (green swordtail): 116731475 Help Entry 116731475         CDS       T07363                                  Symbol skiv2l Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe03018   RNA degradation Brite KEGG Orthology (KO) [BR:xhe00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     116731475 (skiv2l)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:xhe03019]     116731475 (skiv2l) Enzymes [BR:xhe01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      116731475 (skiv2l) Messenger RNA biogenesis [BR:xhe03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      116731475 (skiv2l)   mRNA degradation factors    3'-5' decay     Ski complex      116731475 (skiv2l) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD Helicase_C ResIII MTR4-like_stalk DUF3516 Motif Other DBs NCBI-GeneID:  116731475 NCBI-ProteinID:  XP_032437124 LinkDB All DBs Position 13:10224408..10254511 Genome browser AA seq 1246 aa AA seqDB search MDRIHVPPVGPMDLPLSLLEMGRSGRFELITHPLPDQPLPPQSTLPHGLPPTSLGLEREV EKRFLQDPAWLPIHDTDFAFQKFLKVTERKVNVDSLLSCAPSLLHSGLSVVRDPTTGMLL DFTEVLLENTGLSAKNSLSLQRQPGPPSESLRGSNTNYPFLPGGMEELTLDQIKTRSEQE EEINFEKDLLKIPPGLKAGMDFSDKVAKIAKPEVNLMSLLSTLEDIPDLQPEAEEKEDDK AGQEAVNIPRTNSLEDLGIKDAESSCSQTEAGKTDKSKPKENPEEKKKWAIPVDILSPCE DFYKRIPNPAFKWPFELDTFQKQAVLRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMT RTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLSPESSCLIMTTEILRSMLYNGSEVI RDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKRH IYVISTMKRPVPLEHYLYTGNSTKTQKEMFLLVDAAGNFLTKGYYNAVDTKKERTSKHAQ SFGTKSMPQHTSASQDRAVWLTLLHFLSQRQQTPVVAFTFSRTRCDENARSLDSMDLTTS IEKAEIHSFFQKSLSRLRGGDRQLPQILLMRDLLKRGIAVHHSGILPILKEVIEMLFSRG LVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGT VIILCKSGVHEMADLHAMMMGKPTILQSQFRLTYTMILNLLRVEALRVTDMMRRSFSESH RDTQAHEKRISHLKQMLASLPPLETEGQLSDILPYYHTATEMQNTREALQKAILESVNGL KALSVGRVVIVNNKQHLNALGVILQVSNDAVNRTFMALIICEKGNEEVDRKAEDNAAFQH LYNTALFIPEGPCSHTVQKLKLQDISAITVKTLKVISDRIIDNYNKRQQPRFRAEPPGQA ISTTTQELLRLAEANPGGVATLDPVNDLQLKSVDVVEGSMRLRVLQDSLRDFNCVHSPTF AEQFARIKERMSVQEELDRLLFLVSDQSLMLLPEYHQRIKVLQSLQYIDSSGAVQLKGRV ACQISSHELLLTELLFENVLSPLAPEESAALLSCLVFTQNTQTEPHITSTLKESIDRVLS VAQRIGQLQRECGIAQTAEEFVGQFKFGLTEVVYCWARGMPFAEIAMLTDVQEGTVVRCI QRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLYTH NT seq 3741 nt NT seq  +upstreamnt  +downstreamnt atggacagaatacatgtaccccctgtcggccccatggacctgccgctgtccctgctggag atgggacgctcaggaaggtttgagctcatcacacacccgctgcctgaccagcctttgcct ccccagagcacgcttccccatggactcccacccaccagcctgggcctggagagagaagtg gagaaacggtttctgcaggatccagcctggctgcccatccatgacacagactttgccttt cagaagtttctcaaggtgactgaaaggaaggttaatgtcgactctttgctcagctgcgcc ccgtctctgcttcactctgggctctcagtcgtcagagatccaaccacagggatgctgctg gacttcacagaggttttacttgaaaacactggcctgtcggccaaaaactcgctgtcactg cagcgtcagcctgggcctccttctgaaagccttcggggaagcaacactaactaccccttc ctccccggaggaatggaggaactcactctggaccaaattaagacgagatctgagcaggag gaggaaataaactttgagaaagatttactaaaaatccctcctggactcaaagccgggatg gatttctctgacaaagttgccaaaatagcaaaaccagaggtgaacctcatgtctctgctg tccacactggaagacattcctgatcttcagcctgaagcagaggagaaggaggatgacaaa gcaggacaagaggccgtcaacattcccaggactaacagcctggaagacctgggaataaag gatgcagagtcttcttgttcccaaacagaggcaggaaaaacagacaagtcaaagccaaaa gagaacccagaggagaaaaagaaatgggccatccctgtggacattctgtcaccctgcgag gatttctacaaacgcatcccaaacccggcattcaagtggccctttgagttggacactttc cagaagcaggctgtgctgaggctggaggcccacgactccgtttttgtagccgctcacacg tcggccggcaaaacggtggtggctgagtacgccatcgctctgtcccagaaacacatgaca aggaccatctacacgtctcccatcaaagctctgtccaatcagaaattcagagactttaaa aacacttttggggacgtgggactcctgaccggagacgtccagctcagtcccgagtcttcc tgtctcatcatgaccacagagatcctcaggtcgatgttgtacaacggctcagaggtcatc agagacctggagtgggtcatcttcgatgaggtccactatattaatgatgctgagagaggg gtggtttgggaggaagtgctgatcatgcttccagatcacgtcagcatcatcctgctcagc gccacggtgccgaatgctttggagttcagcgagtggatcggtcgtattaagaagaggcac atttacgtgatcagcaccatgaagcggcccgtacctttggagcattacctgtacactgga aacagcaccaagacccagaaggagatgttcctgctggtggacgctgcaggaaacttcctc accaaaggctactataacgctgttgacacaaagaaggagcggaccagcaaacacgcccag tcattcggcacaaagagcatgcctcagcacacctcagccagccaggaccgagcggtgtgg ctcacgctgctacacttcctgtcccagcggcagcagacccccgtggtggccttcaccttc tctcggacgcgatgcgacgagaacgcccgctcgctggactccatggacctcaccacctcc atagagaaggcggagatccactccttcttccagaagagcctcagtcggctgcgaggagga gaccggcagctgccgcagatcttgctcatgcgggaccttctgaagagaggcatcgccgtc catcacagcgggatcctcccgatcctgaaggaggtcatcgagatgcttttctcccgaggt ctcgtaaaggtgctgttcgccacagagacatttgcaatgggagtgaacatgcccgccagg accgtggtgttcgacagcatcaggaaacacgacggcaccggcttcaggaacctgctgcca ggcgaatacattcagatggcgggcagagcaggaaggagaggcctggacgccacaggaaca gtcatcattttgtgtaaatcgggcgttcatgagatggccgatctgcacgccatgatgatg ggaaaacccaccatcctccagtcccagttcagactgacctacaccatgatcctgaacctg ctgcgggtcgaagcgctccgagtgaccgacatgatgaggaggagcttctctgaaagccac agagacactcaggcgcatgagaagaggatcagccacctgaagcagatgttggcgtctctt cctcctctagagacagagggccagctctctgatatcttgccttattatcatacagcaaca gagatgcagaacaccagagaagcccttcagaaagccatcctggagtctgtgaacggactc aaagcgctgtctgttggccgagttgtcatcgtcaacaacaagcagcatcttaacgcgctg ggagttattctacaggtgtccaacgacgctgtgaatcgcaccttcatggcgctcattatc tgtgagaaggggaacgaggaagtggatagaaaggctgaggacaacgccgctttccagcac ctgtacaacacagctctgttcatacctgaaggtccatgcagccacacggtgcagaagtta aaacttcaggacatatccgccatcacagtgaaaaccctcaaagtgatttccgacagaata atcgataactacaacaagaggcaacagcctcggttcagggccgaacctcccggccaggcc atctccacgacaacgcaggagctgctgcgcctggccgaggcgaacccgggcggcgtggcc accctggacccggtgaacgacctccagctgaagagcgtggacgtggtggagggctccatg aggctccgtgtgcttcaggacagcctgcgggacttcaactgcgtccactcgcccaccttc gcagagcagtttgctcgtattaaggagaggatgagcgttcaggaggagctggaccggctg ctgttcctggtatcggaccagtccctgatgctgctgcctgaataccaccagaggatcaag gtccttcagtcgctgcagtacatcgacagcagcggcgcggtgcagctcaaaggccgagtg gcctgtcagatcagcagccacgagctgcttctgaccgagctgctgttcgagaacgtcctg agcccgctggcgcccgaagagagcgccgccctgctgtcctgcctggtcttcacccagaac acgcagacggagccgcacatcaccagcactctgaaggagagcatcgaccgcgtgctgtcg gtggcccagcgaatcgggcagctgcagcgggaatgtgggatagcacagacggccgaggag tttgtaggccagttcaagttcggcttgactgaggtggtgtactgctgggccagaggcatg ccgttcgctgagattgcgatgctcacagacgtgcaggagggcacggtggtccgctgcatc cagcgcctggacgaggtgctgaaggaggtgcggcaggccgcccgcatcgtgggagactct gtactgggcagcaagatggagaaagcctcgttggccatccgcagggacatcgtcttcacc gcctccctctacacccactga

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