Xiphophorus hellerii (green swordtail): 116732993
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Entry
116732993 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116732993
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116732993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
zf-RING_10
MRP-S31
BshC
Corona_7
Gp58
Motif
Other DBs
NCBI-GeneID:
116732993
NCBI-ProteinID:
XP_032439504
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Position
14:complement(25467741..25473047)
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AA seq
558 aa
AA seq
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MAWRGVQIDLESMSCYICLDLLTDPVTIPCGHSYCMDCINDDWDGEDQRRIYNCPQCRKA
FIPRPFPKKNIMIASVVDDMKKTESQAAVSDHCYAGPEYVACDVCTGRKRKAVKSCLSCS
VSYCGNHLQPHYDAPPLQRHKLVNPTNKLQQNICSRHDELMKIFCRTDQQCICYLCNIEE
HKGHETVPAATERAEKQKKLQENRQQIHQRIQDQEKDVKLLQQEVEAINVSADKAVEDSE
KIFTELIRFLQERSSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTE
DHNQFLLNYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELRDKLQDVLRDTWTNIELK
VTEVDVLLAEPEESNRARCLKYSQEITLDPNTVHKNLVLSEGNRKVIFVYQEQSYPHHSD
RFSDYYYQVLSRESLTGRCYWEVEMRGGAGVGVAVSYKNINRAGRSDKCLFGFNNKSWSL
YCDRNSYTFHHNNIVTPVSGPVSSRIGVYLDHRAGILSFYSVSETMTLLHRVQTRFTRPL
HAGVYVHADSISKFIKPK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcttggagaggagttcagatagacttagaatctatgtcctgctacatctgtttggat
ctactgacggatccggtgactattccctgtggacacagttactgtatggactgtattaat
gacgactgggatggagaagatcagaggagaatctacaactgtcctcaatgcaggaaagcc
ttcataccgaggcctttcccaaagaagaacatcatgatagcttctgtagtcgatgatatg
aagaagactgaatcccaagctgctgtatcggatcactgctatgctggacctgaatatgtg
gcctgtgatgtctgcactgggaggaagaggaaagctgtcaagtcctgcttatcctgttca
gtttcttactgtgggaatcacctccaacctcactatgatgctccacctttacagaggcac
aaactggtgaatcccaccaataagcttcagcagaacatctgctctcgtcatgatgagctg
atgaagatcttctgtcgtactgatcagcagtgtatctgttatctctgcaatattgaggaa
cataaaggccatgaaacagtcccagctgcaacagaaagagctgagaagcagaagaagctc
caggagaatcgacaacaaatccatcagagaatccaggaccaagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatgtctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtttcctccaggaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtca
gagctcagagacaaactacaggacgtcctgagagacacatggacaaacatcgaactgaag
gtcactgaggtggatgttttattggcagaaccagaagaaagtaacagagctagatgttta
aaatattcacaagaaatcactctggatccaaacacagtacacaaaaatttagttttatct
gaggggaacagaaaagtaatatttgtgtaccaagaacaatcttatccccatcattcagac
agattcagtgattattattatcaggttcttagtagagagagtctgactggacgttgttac
tgggaggtggagatgagaggtggagctggagttggagtagcagtttcatacaaaaacatc
aacagagcaggaagatcagataagtgtttatttggatttaataacaaatcttggtcatta
tattgtgacagaaacagttacacttttcatcacaacaacattgtcactccagtatcaggt
ccagtttcctccagaataggagtgtacctggatcacagagcaggtattctgtctttctac
agcgtctctgaaaccatgactctcctccacagagtccagaccagattcactcggcctctg
catgctggagtttatgttcatgccgactccatttcaaagttcattaaaccgaaatag
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