Xiphophorus hellerii (green swordtail): 116733337
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Entry
116733337 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116733337
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116733337
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
MRP-S31
Motif
Other DBs
NCBI-GeneID:
116733337
NCBI-ProteinID:
XP_032440037
LinkDB
All DBs
Position
14:complement(25202590..25204865)
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AA seq
547 aa
AA seq
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MDSSKYSCSICFDLLKDPVTIPCGHSYCMNCIKCHWDGEDQRKINSCPQCRKEFIPRPNL
EKNIMLSELVEDLKKTGLQTAPAVYCYAGPEDVACDFCTGRKMKAVKSCLVCLVSYCQNH
LQPHYESPTFKKHNLVEASTNLQQNICSHHDEVMKIFCRTDQQCICYLCTMDEHKGHETV
PAATERAEKQKKLQESRQQIQQNIEDQEKDVKLLQQEVEAINVSADKTVEDSEKIFTELI
RLLQERSSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTEDHNQFLL
NYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELRDKLQDILRDTWTNNSQKFSEVDVL
LSEPEPKTRDEFLKYSTEITLDPNTAHQSLALLQRNRKVSLRHQPHPDHPERFTGWSQVL
SRESLTGSCYWEVEWSQGGVEVAVSYKNISRTGRLDESKLGFNDKSWALRCGSKCCTFWH
NKVSTSIKSPVSSRVGVYLDHKAGILSFYSVSETMTLLHRVQTRFTQPLYAGIWLFNQGT
AEFIAVK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggattcatctaaatactcttgctccatctgtttcgatctactgaaggatccggtgact
attccttgtggacacagttactgcatgaactgtattaaatgccactgggatggagaagat
cagaggaaaatcaatagctgccctcagtgcaggaaagagttcataccaaggcctaacctg
gagaaaaacatcatgctgtcagaattggtggaggacctgaagaagactggactccaaact
gcaccagctgtctactgctatgctggacctgaagatgtggcctgtgatttctgcactggg
agaaagatgaaagctgtcaagtcctgtctggtctgtttggtttcttattgccaaaatcac
cttcaacctcactatgaatcacctacgtttaaaaaacataatctggttgaagcgtctact
aaccttcagcagaacatctgctctcatcatgatgaggtgatgaagatcttctgtcgtact
gatcagcagtgtatctgttatctctgcactatggatgaacataaaggccatgaaacagtc
ccagctgcaacagaaagggctgagaaacagaagaagctccaggagagtcgacaacaaatc
cagcagaatatagaggaccaagagaaagatgtgaagctgcttcaacaggaggtggaggcc
atcaatgtctctgctgataaaacagtggaggacagtgagaagatcttcactgagctgatc
cgtctcctccaggaaagaagctctgatgtgaagcagcagatcagatcccagcaggaaact
gaagtgagtcgagtcaaagatgttcaggagaagctggagcaggagatcactgagctgaag
aggaaagacgctgagctggagcagctctcacacacagaggatcacaaccagtttctcctc
aactacccctcactgccagcactcagtgagtctacacactcatccagcatcaacatccgt
cctctgagacactttgaggacgtgacagcagctgtgtcagagctcagagacaaactacag
gacatcctgagagacacatggacaaacaactctcagaaattcagtgaggttgatgttcta
ctgtcagaaccagaaccaaagaccagagatgaattcttgaaatattcaacagaaataact
ttggatccaaatacagcacatcaaagtttggcactgcttcagagaaacagaaaagtatca
ttaaggcatcaacctcatcctgatcatccagaaagattcactggctggtctcaggtcctg
agcagagagagtctgactggaagttgttactgggaggtggagtggagtcagggaggagtt
gaagtagcagtttcatacaagaatatcagcagaacaggaagattagatgaatctaagctt
ggatttaatgacaaatcttgggcactgcgttgtggcagtaaatgttgcacattctggcac
aacaaagtaagtacttccattaaaagtccagtttcctccagagtcggagtgtacctggat
cacaaagcaggtattctgtctttctacagcgtctctgaaaccatgactctcctccacaga
gtccagaccagattcactcagcctctgtatgctgggatttggctgtttaatcaaggaact
gctgagtttatcgcggttaaatag
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integrated database retrieval system
