Xiphophorus hellerii (green swordtail): 116733338
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Entry
116733338 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116733338
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116733338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-RING_2
Prok-RING_4
MAP65_ASE1
U-box
MRP-S31
Gp58
Y1_Tnp
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
116733338
NCBI-ProteinID:
XP_032440038
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Position
14:complement(25128744..25133666)
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AA seq
544 aa
AA seq
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MDSSKCSCSICLDLLKDPVTIPCGHSYCMNCIKDCWDGEDQRRIHSCPQCRKEFIPRPVL
EKNIMLSELVEDLKQTGLQSAPADHCYAGPEDVACDFCTGRKMKAVKSCLVCLASYCKNH
LQPHYESPTFKKHNLVEASTELLQNICSRHDEVMKIFCRTDQQCICYLCTMDKHKGHETV
PAAAERAEKQKELQESRQQIHQRIQDQEKDVKLLQQEVEAINVSADKAVEDSEKIFTDLI
RLLQERSSNVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTEDHIQFLL
NYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELRDIMQDVLRATWRNISLKVTDLGVL
LSEPEPKNRTGFLKYSQEITLDPNTAHRELLLSEGNRKVTRMKQLQPYPDHPERFSVHNQ
VLSRESLTGRCYWEVEWGGGVYVAVSYKNINRTEAFGFNDRSWSLYGYTDSYTFYHNKVQ
TPVSGPVSSRIGVYLDHRAGILSFYSISETMTLLHRVQTRFTQPLHAGIRPFSYGDSAMF
FKLK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggattcatctaaatgctcttgctccatctgtttggatctactgaaggatccggtgact
attccctgtggacacagttactgcatgaactgtattaaagactgctgggatggagaagat
cagaggagaattcacagctgccctcagtgcaggaaagagttcataccaaggcctgtcctg
gagaaaaacatcatgctgtcagagttggtggaggatctgaagcagactggactccaatct
gctccagctgatcactgctatgctggacctgaagatgtggcctgcgatttctgcactggg
aggaagatgaaagctgtcaagtcctgtctggtctgtttggcttcttattgcaaaaatcac
cttcaacctcactatgaatcacctacatttaaaaaacataatctggttgaagcgtctact
gaacttctgcagaacatctgctctcgtcatgatgaggtgatgaagatcttctgtcgtact
gatcagcagtgtatctgttatctctgcactatggataaacataaaggccatgaaacagtc
ccagctgcagcagaaagagctgagaagcagaaggagctccaggagagtcgacaacaaatc
catcagagaatccaggaccaagagaaagatgtgaagctgcttcaacaggaggtggaggcc
atcaatgtctctgctgataaagcagtggaggatagtgagaagatcttcactgatctgatt
cgtctcctccaggaaagaagctctaatgtgaagcagcagatcagatcccagcaggaaact
gaagtgagtcgagtcaaagatgttcaggagaagctggagcaagagatcactgagctgaag
aggaaagatgctgagctggagcagctctcacacacagaggatcacatccagtttctcctc
aactacccctcactgccagcactcagtgagtctacacactcatccagcatcaacatccgt
cctctgagacactttgaggacgtgacagcagctgtgtcagagctcagagacataatgcag
gatgtcctcagagccacatggagaaacatctcactgaaggtcactgacttaggtgttcta
ttgtcagaaccagaaccaaagaacagaactggattcttaaaatactcacaagaaatcact
ctggatccaaacacagcacatagagagctgcttttatctgaggggaacagaaaagtaaca
agaatgaaacagctacagccttatcctgatcatccagaaagattttccgttcataatcag
gttctgagtagagagagtctgactggacgttgctactgggaggtggagtggggcggagga
gtctatgtagcagtttcatacaagaacatcaacagaacagaagcatttggattcaatgac
agatcttggtccttgtatggttacacagacagttacacattttatcacaacaaagttcaa
actccagtatcaggtccagtttcctccagaataggagtgtacctggatcacagagcaggt
attctgtctttctacagcatctctgaaaccatgactctcctccacagagtccagaccaga
ttcactcagcctctgcatgctgggatccggcctttctcttatggagactctgctatgttc
tttaagttgaaatag
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