Xiphophorus hellerii (green swordtail): 116734195
Help
Entry
116734195 CDS
T07363
Symbol
elp3
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116734195 (elp3)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
116734195 (elp3)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
116734195 (elp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
116734195
NCBI-ProteinID:
XP_032441315
LinkDB
All DBs
Position
15:complement(22133555..22163896)
Genome browser
AA seq
553 aa
AA seq
DB search
MGKPKKKSDISRAELMMMTIADVIKQLVEAHEQGKDINLNKVKTKTSAKYGLEAQPRLVD
IIAAVPPQYRRVLVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSD
FEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPE
EYRDYFIRNLHDALSGHTSNNVAEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLSYG
CTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLSKDAGFKVVAHMMPDLPNIGMERDVE
QFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYKSYTPSALVDLVARILALVPPW
TRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRPYQ
VELVRRDYVANGGWETFLSYEDPEQDILIGLLRLRRCSPQSFRPELKGGVSIVRELHVYG
SVVPVSSRDPSKFQHQGFGMMLMEEAERIARGEHGSHKLAVISGVGTRNYYRKMGYELQG
PYMVKQLYGARLD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaccaaagaaaaagagtgacatcagccgagctgagctgatgatgatgaccatc
gccgacgtcatcaagcagctggttgaagcgcacgagcagggcaaagacatcaacctcaac
aaagtgaagacgaagacctcagcgaagtacggactcgaagcccagccacggctggttgac
atcatcgcggctgttccgccacagtaccgccgggttctggtgcccaagctgaaagccaaa
cccatccgaaccgccagcgggattgcggttgtggctgtgatgtgcaaaccacatagatgt
cctcacatcagctttacaggaaacatctgtgtctactgtccaggtggaccggactctgat
ttcgaatactccacacaatcgtacaccggctacgagccaacgtccatgagggcgatccga
gctcgctatgacccctttctacagaccagacatcgagtggagcagctgaagcagctgggc
cacagtgtggacaaggtggagttcatcgtgatgggtggcaccttcatggccctgcctgag
gagtacagagactacttcatcaggaacctccatgacgccctgtcaggtcacacctccaac
aacgtggcggaggccgtcaggtactcggagcgcagcaacaccaagtgcgtgggaatcacc
atagagacgcggccggactactgcctgaagcgccacctcagcgacatgctgagctacggc
tgcacccggctggagatcggcgtgcagagtgtttacgaagatgtggccagagacaccaac
agaggccacacagtgcgagctgtgtgtgagtctttccagctgtcaaaggatgctgggttt
aaggtcgttgcacacatgatgccagacctgcccaatattggcatggagagggacgtggag
cagtttatagagttttttgagaatccggcgttcaggcccgatggtctgaagctctacccg
acgctggtgatccgaggcacgggtctgtacgagctgtggaagacgggccgctacaagagc
tacacgcccagcgccctggtggacctggtggcccgcattctggccctggtgccgccctgg
acacgggtgtaccgcgtccagagggacatccccatgccactggtgagctctggcgtggag
cacggcaacctgagggagctggctctggctcggatgaaggacatgggcactgagtgccga
gacgtacggacccgagaagttggcattcaggaaatccaccacaaagtcaggccttaccag
gtggagctggtcaggagggactacgtggccaacggcggctgggagaccttcctgtcctac
gaggacccggagcaggacatcctgattggtctcctgcgcctgcgccgctgctcgccccag
tccttccgacccgagctgaaaggaggcgtgtccatcgtccgcgagctgcacgtctacggc
agcgtggtcccagtgagcagccgcgaccccagcaagttccagcaccagggcttcggcatg
atgctgatggaggaggctgagagaatagccagaggggaacacggctcgcacaaactggct
gtcatctcaggtgtaggaaccagaaactactacaggaagatgggctacgagctgcagggg
ccgtacatggtgaagcagctctacggtgcacgactggactga
DBGET
integrated database retrieval system
