Xiphophorus hellerii (green swordtail): 116734653
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Entry
116734653 CDS
T07363
Symbol
sox7
Name
(RefSeq) transcription factor SOX-7
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116734653 (sox7)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116734653 (sox7)
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GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
YABBY
Ccdc124
Motif
Other DBs
NCBI-GeneID:
116734653
NCBI-ProteinID:
XP_032442062
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Position
15:16650631..16654368
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AA seq
404 aa
AA seq
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MAALISAYFESFDCPPGDGDVPDAHVSHRTPVDKTPEPRIRRPMNAFMVWAKDERKRLAI
QNPDLHNAELSKMLGKSWKALTPPQKRPYVEEAERLRVQHMQDYPNYKYRPRRKKQLKRI
CKRVDPSFLLSGLAPDHVSLPEQRALSHPLDKDEGSSNGVGGSFSSSSPALPSVRTFREP
AGSSSSFDTYPYGLPTPPEMSPLDAMDHEHMPSTYYSTSGSSSVSCSSTVSCPDEHHQSQ
THMGSPPPYHTDYTQTQIHCGSTHLGHISHIPQTGGTSGLIPGPPLSYYSSSSFPPIHHG
HHQGHLGQLSPPPETQGHLETLDQLSQAELLGEVDRNEFDQYLNSTGGGFHPDQASGMTV
TGHIQVSSTTATSASVCPSSTTETSLISVLADATAAYYNNYGIS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctcatcagcgcgtacttcgagtccttcgattgtcctccgggagacggagat
gtccctgacgcgcatgtctcacacaggacccccgtggacaagacgccggagccgcggatc
aggcggcccatgaacgcgttcatggtctgggccaaagacgagcgcaaacgcctggcgatt
caaaacccagacctccacaatgcagaactcagcaaaatgttgggaaagtcgtggaaggct
ctgactcccccacagaaaaggccgtacgtggaggaagcagagaggctccgagtgcagcac
atgcaggactatcccaactacaagtatcgtccccgcaggaagaaacagctaaaacgcatc
tgcaagagagtggaccccagttttctcctgagtgggctggctcctgaccacgtttccctg
cctgagcagcgagccctcagtcacccgctggacaaagacgagggcagctctaatggagtc
ggcggcagcttctcaagctccagccccgctctgcccagcgtgagaaccttcagagagcct
gctggctccagcagcagctttgacacctacccctacggcctgcccacacctcctgagatg
tcccccttagatgccatggaccacgagcatatgccctcgacctattactcaacgtccggt
agctcttcagtctcctgctcgtccacggtctcctgtccagatgaacaccatcagagccag
acgcatatgggcagcccacctccttaccacactgactacacgcagacccagatccactgt
gggagcacacacttaggtcatatttctcacataccccaaactggaggcaccagtggactg
atccctggcccgcccctgtcctactacagctcctcgtctttcccgccaattcaccatggg
caccaccagggtcacctgggtcaactttcccccccaccagagactcagggtcacctggag
actttggaccagcttagccaagctgagcttttgggcgaggtggatcgtaatgagttcgac
cagtacctgaactccactggaggtggtttccaccctgaccaagccagtggcatgactgta
actggacacatccaggtgtcatcgactaccgccacctccgcctcagtgtgtcccagcagc
accacagaaactagcctaatttccgtgctcgcagatgcaacggcggcctactacaacaac
tatggcatctcataa
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