Xiphophorus hellerii (green swordtail): 116734894
Help
Entry
116734894 CDS
T07363
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116734894
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116734894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116734894
NCBI-ProteinID:
XP_032442328
LinkDB
All DBs
Position
16:20321873..20389157
Genome browser
AA seq
460 aa
AA seq
DB search
MLMSTDVASIMLPVNRGIMERDRDLETAAGGAHPNAAAGAAVVRGMKRGDPEPDAQTAAA
LTDPTGAECKRPRIDGSGEIGQNNEPLNPGFHGYAPHSQGSQDSTGGQEGLVAPPFTTFP
PPPPPQNGLPGTEFGPGAMFAAAGQSAVEVGAGANGATTTANNNNGKTEETSQGEAGAQC
SAGGTGAGGSTGDSAEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS
KGFGFVTFENSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKIVSPYPNGEALSTLP
YAGWKLSPMVGAVYGPEIYAVPGFPYPTAAAAAAATTAAAFRGAHLRGRGRPVYSAVRAA
VPQPAIPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAAAYRYAQPAAVTGATAAAAAYSD
SYGRVYTTDPYHALTPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctataatgctgcccgttaatcggggaataatggag
cgcgacagggacctcgagacggcggccggcggagcgcatccgaacgcggccgccggagcc
gcggttgtccgggggatgaagcgcggagacccggagcccgacgctcagaccgccgctgcc
ctgactgacccgaccggggcggaatgcaagagaccgaggatagacggctccggtgagatc
ggacagaacaatgagcctttaaaccccggtttccatggatacgcacctcacagtcagggc
tcccaggactcaaccggcggacaggagggtttagtagccccgccctttacgaccttcccc
ccacctccacctcctcaaaacggcctaccggggacggagtttggtccgggggccatgttt
gctgccgcgggccaaagtgcagtggaggtcggagcgggtgctaacggagccacgactaca
gccaacaacaacaacggaaagacggaggagacgtcccagggcgaggcgggtgcgcagtgt
tccgcaggaggcacgggagcgggcggctcaacgggagactccgcggaggccaaggggacc
cccaagcgcctccacgtctccaacatccccttccgcttccgggacccggacctcaggcag
atgtttgggcaatttgggaagattctggatgtagagattattttcaatgagagagggtca
aagggtttcggctttgtgacatttgaaaacagcgccgacgcggagaaagccagagaaaag
ctccacggcacgctggtggagggccgtaaaattgaggtgaataatgccactgccagggtg
atgactaacaagaaaatcgtcagcccttaccctaatggagaggctctcagcacgctgccc
tatgcagggtggaagctaagtcccatggtgggagcggtgtatgggcccgagatctacgca
gtccctgggtttccctacccaaccgcagcggcggcagcggcagccacgacggcggcggcg
ttccgcggcgcccacctcagaggccgaggccggcccgtttacagcgccgtcagggcggcc
gtgcctcagcccgccatccctgcataccctggcgtggtgtatcaggatgggttttacgga
gctgcagacttatatggaggctatcctgctgctgccgcggccgccgctgccgccgcgtat
cgctacgcccagcctgctgccgtaaccggagcaacagccgcagctgccgcctacagtgac
agttatgggcgggtatacactacagatccgtaccacgctttaactccagctgctgctgcc
tacggagtgggagccatggctagtttataccgggcaggatacagtaggtttgctccttac
taa
DBGET
integrated database retrieval system
