Xiphophorus hellerii (green swordtail): 116735235
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Entry
116735235 CDS
T07363
Name
(RefSeq) homeobox protein Hox-B3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116735235
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
116735235
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
DUF4074
Homeodomain
TAF1D
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116735235
NCBI-ProteinID:
XP_032442868
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Position
16:complement(25214799..25264564)
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AA seq
477 aa
AA seq
DB search
MQKTTYYDNSPTLFGGYSTYQVQGAAAAANGFGGYDAPVPVTHHQPPFQSPTHLDVDSYQ
RSACSLQSLGNNSGHQQQQLAKTKELNGSCMRPSLPPEHHPASQVSPPLPPKSSNGNVTT
QQPGGSAGSSTVSKSGPNKSSNSASSTSSSTSSSSSSLPPNPTLTKQIFPWMKESRQTTK
QKNCSPSNNSGNASGGTESGSSGEKSPSGGSSASSKRARTAYTSAQLVELEKEFHFNRYL
CRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGLSSSSGGPSPAGSPPLTMQSSA
SFLNSMHPMGGGGGGPTYETPSPPSFGKLHQGVSYSMSTAYSNVPMKGCPPQKYGAPDPD
YGDPHHSLVQANNAGYGTPTNMQASPVYVGGGSYVEPMAGSGPSMYGLNHLGPTPPHHQT
IDYNGAGPMSTTNQHHVGGGGPQGPCDPPTHPTYTELSAHHTSTQGRIQEAPKLTHL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagacaacatactacgacaactccccaacgctctttggtggctactctacctac
caggtgcaaggagcagcagcagctgccaatggctttgggggctacgatgccccggtccca
gtgacccaccaccaacctcccttccagtccccaacccatctggatgtggattcgtaccaa
cgctccgcctgctctttgcagtcactaggcaataatagtggccaccagcagcagcagcta
gccaagaccaaggagctgaatggcagctgcatgcggcccagtttgccgcctgagcaccac
ccagcctcccaggtgtcccctccactgccccccaaatccagcaatggtaatgtcaccact
cagcagccggggggcagtgctgggtcttctacagtctctaaatcaggccctaataagtca
tcaaactctgcctcctccacatcttcttctacatcatccagctcctcttcactgccgccc
aacccaacgctaaccaagcagatctttccctggatgaaggagtctcgacaaacaaccaag
cagaaaaactgttcacccagcaacaactccggcaacgcatcagggggcactgagagcggc
agcagtggggagaagagtccttccggaggttcgtctgcatcatccaagcgcgctcgaaca
gcatacaccagcgctcagctggttgagctggagaaggagttccacttcaacaggtacctg
tgccgacccaggcgtgtggaaatggcgaacctgctcaatttgtccgaacggcagattaag
atctggttccagaatcgacgcatgaagtacaagaaggaccagaagtccaagggcttgagc
tccagctctggaggaccatctccggcaggttcccctcctctcaccatgcagtcctctgcc
agcttcctgaactcaatgcatccaatgggagggggaggagggggccctacttatgagacc
ccctccccaccatcctttggaaagctgcaccagggagtgtcttattctatgtccactgcc
tattccaatgttcctatgaagggctgccctcctcagaaatacggtgccccagatccagac
tatggtgatccccaccacagcctagtacaggccaacaatgctggctatgggacgccaaca
aacatgcaggccagtccagtctacgttgggggtggcagctatgtggagcccatggctggc
tctgggccctccatgtatggcctaaaccacctgggccctacgccgccccaccaccaaacc
atagactacaatggcgcagggcccatgtcaactaccaaccagcaccatgtgggtggaggg
ggccctcagggtccctgtgacccacccacacacccaacttacaccgagctgtcagcacac
cacacctcaactcagggcagaatccaagaagcacccaagctcacccacctgtag
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