Xiphophorus hellerii (green swordtail): 116737006
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Entry
116737006 CDS
T07363
Name
(RefSeq) liprin-beta-1-like
KO
K27096
liprin-beta
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116737006
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116737006
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
Crescentin
DUF16
Motif
Other DBs
NCBI-GeneID:
116737006
NCBI-ProteinID:
XP_032445836
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Position
17:complement(8591458..8619212)
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AA seq
882 aa
AA seq
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MMSDASEMLAAALEQMDGIIAGSKAIDYSNGLFDCQSPTSPFLGGFRVLHLLEDLRAALE
LMDNEERDNLRCQIPDSTAEGLVEWLHGRTPNVHGSEAVYQERLSRLESDKECLILQVSV
LTDQVEVQGEKIRDLDKSLELHREKLNAAEELLQQELLNRTALETQKLELMTEVSSLKLK
LASLERDHRGNEGLYQEVTDLRFRLTDMENERLQCEKKLKGAKEEMQDLQRQLEEQDHEL
RRLKGETHHKIAGVERDTEMVKIKRVLELLTSENDEKERRIKELEESLTKCRRVQELVRE
KLKEDDYADITDDPLLSLSMEVDQVTLELEGEAGRSCDESIPCIAVLSEMNELDRERQLQ
AAQSSSDDSHGDGSAVTGSTEQVKNKSGTASSSKGNTSDGNFGSKKVRASFGRGFFKLRG
GKQMASSPNLAETERKGTDHLDLAGVPPQKPHDAAPLPSSPETKKKSSGFRKFFGRLKRS
HSTSFNLDDGAETEFRRGGVRATAGPWLGWSRDSKHVAVDVPLSLWRKEDVCAWLQEQGL
GLYSVQGQNWIKSGQTLLQASQHDLEKELGMKLPLHRKKLQLALQTLGSEGDDLQGKLDH
NWVTRWLDDIGLPQYKSNFDEARVDGRMLHYMTVEDLLSLKVGSVLHHLSIKRAIQVLRL
NSYEPNCLRRRPSDESNITPAEISRWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLE
PRFNVEALALLLNIPPSKTLLRRHLATHFHLLVGSEAQRLKQECLENPDYSVLTATAKVK
PRRSSFGGFGSLRRKRHDDGEDYICPMNVEMPKSSSFQRKVCVYEETLDHFEQMEDSEGT
VREIGAFSEGINNLTSMLKEDELFQVISICSSDDKTEALDSS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagacgctagtgagatgttggcagcggccctggagcagatggatgggatcatt
gcaggctccaaggccattgattactccaacgggctgtttgactgccagtcgcccacgtct
cccttcctgggcggcttccgcgtgcttcacctgctggaggacctcagagccgcgctggag
ctgatggacaacgaggagcgggacaacctgcgctgtcagatcccagattccaccgcagag
gggctggtggagtggctgcacggacggacacccaacgtccacggctctgaggccgtctac
caagaacgtctttcacggctggagagtgacaaagagtgtcttattctgcaggtcagtgtg
ttgacagaccaggtggaggtgcagggagaaaagatccgggacttggataaaagtctggag
cttcatcgggagaagctgaatgctgcagaggagctgcttcagcaggagctgctaaaccgg
acggcgttggagacccagaagctggagctgatgaccgaggtgtcgagtctgaagctgaag
ctggcctctttggagagagatcacaggggcaacgaaggtttgtaccaggaagtgacagac
ctgaggttcaggctgacagacatggagaatgaaagactgcagtgtgagaagaaactaaaa
ggagccaaagaggagatgcaggatctgcagaggcaactggaggagcaagaccatgagctg
aggaggctgaagggagagacccaccacaaaattgcaggggtagaaagagatacagagatg
gtgaaaataaagagggtgttggagctgctgacgtcagagaacgatgagaaggagagaagg
attaaagagctggaggaatcactgacgaagtgcaggagagtacaggagctggtcagagag
aagctgaaagaagacgactacgctgatataacagatgatcccttgctttctctgtccatg
gaggtggatcaggtcaccctggagcttgagggggaggcaggaaggagctgcgatgagtcc
ataccatgcatagcagtgctctctgaaatgaatgaactggacagagaacgacagctgcaa
gcagcgcaaagctcctcagatgattcacatggtgacggttcagctgtaactggcagcact
gagcaggttaagaacaaatcaggaactgcttcctcttctaaggggaacacaagtgacgga
aattttggcagcaagaaagttcgtgcttcatttggccgtggcttttttaaactgcgtggc
ggcaaacagatggccagttcgcccaacctggctgagactgaacgtaaaggcacagatcac
ctcgacctcgctggtgttcctccacagaaaccccacgatgcggctcctcttccgtcatct
ccagaaaccaagaagaagtcaagcgggttcaggaaattctttggcaggttaaagagaagc
cactccacctcgtttaacctggacgacggagctgagacggagttcaggaggggcggagtc
agagccacggccgggccttggctcggctggtcacgcgactcaaaacacgtggccgttgac
gttcctttatctctgtggaggaaagaggatgtttgtgcctggctacaggagcagggcctc
ggcttgtactcggttcagggtcagaactggatcaaatcgggacaaacgttactgcaggca
tcacaacatgatctggagaaggagttgggaatgaagctgcctctccacaggaagaagctg
cagcttgccctgcagactcttggctcagagggcgatgaccttcagggcaaactggaccac
aactgggtcaccagatggctggatgacatcggcctcccacagtacaagagcaacttcgat
gaagcccgagttgatggacgcatgttgcactacatgacagtggaagacctgctgtctctg
aaggtcgggagtgttcttcatcacctcagcatcaagagagccatccaggttctgcgtctc
aactcctatgaacccaactgtctgcggcgccgcccttctgatgagagcaacatcacgccg
gctgagatctctcggtggaccaaccacagagtgatggagtggctgcgctccgtggatctg
gcagaatacgcgcccaaccttagagggagtggagttcatggaggactgatggtgttggag
cctcgattcaacgtggaagcgctcgccctcctgctcaacattcctcccagtaaaaccctg
ctgagacgccacctggccacacacttccacctgctggtcggctcagaggcgcagcgcctc
aaacaggaatgtctggaaaacccagattacagcgtcctcacggcaaccgctaaggttaag
ccaagacgttcatcttttggtggttttggctctctgaggaggaaacgtcatgacgacgga
gaggattacatctgtcctatgaacgtggagatgccgaagagcagcagcttccagagaaaa
gtctgtgtctacgaagaaactctggaccactttgagcagatggaggattctgaaggaaca
gtcagagagattggagcattttcagagggaatcaacaacctgacgagcatgctgaaggaa
gatgagctgttccaggtgatctcaatttgttcctccgatgataaaacagaagctctcgac
tcctcctga
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