Xiphophorus hellerii (green swordtail): 116737124
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Entry
116737124 CDS
T07363
Symbol
tfec
Name
(RefSeq) transcription factor EC isoform X1
KO
K15591
transcription factor EC
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116737124 (tfec)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
116737124 (tfec)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3371
HLH
MITF_TFEB_C_3_N
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
116737124
NCBI-ProteinID:
XP_032446016
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Position
17:11994455..12042218
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AA seq
465 aa
AA seq
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MFQSCSGPDSQWVMSERDDRQIYHSDVIHRSGFQYSYSGVHTGPQAPNWRQYSNTWKVQS
HLENSKFHLHQSQNQPGKQYLTLGSKLASSTGSGHTVPHPHAPGQPLATVPIMRNGHMPA
VSDGSSPNSPVTLLTMGNHEGEFPMDEVIDDLISLESGFNDGGLDCMEPNIIMQGNVSLS
NSMLDVYGGEQGMNPPNGGMSPTSNTTKLTVKREFTEHDTRVMAKERQKKDNHNLIERRR
RYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIRWLQKEQQHSRELESRQKKLEQ
ANRRLLLRIQELEIQARAHGLPNMAAALGTVELSSHLLKQQQQQSPPQVQQQQPQQPPIY
QEDPNSDYLQRIAMVTGVPSIATASGPQDHIQGADACTTFSDPLSHFTDFFTATLKEENQ
LDEILMDDPLSPFGADPLLSAGSPGAASKDSSRRSSFSSAEADDL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtcttgctccggcccagacagtcagtgggtaatgagtgagagagatgaccgt
cagatctatcacagcgacgtcatccatcgttctggcttccaatattcctacagcggagtc
cacaccggaccacaagctcctaactggcggcagtatagcaacacatggaaggtacaaagc
cacctggaaaactccaagttccaccttcatcaaagccaaaaccagcctgggaagcagtac
ctgacactgggctccaagctggcctcttcgaccggatcaggtcacactgtaccgcatcca
cacgcccctggccagccgctggccaccgtgccgatcatgaggaacggacacatgcccgcc
gtcagtgacgggagcagccccaacagccccgtcaccctgctgacaatgggcaaccacgaa
ggcgagtttccaatggatgaagttattgatgacctaattagtcttgaatccggcttcaat
gatggaggcttggattgcatggagcctaacatcataatgcaaggcaatgtctccctcagc
aacagcatgctggacgtctatgggggtgaacaaggtatgaacccccctaatggtggaatg
agtcccacatctaacaccacaaagctcactgttaaaagggaatttacagagcatgacacg
cgggttatggccaaagagagacagaaaaaggacaatcataatttgattgaaagaaggcga
agatacaacattaactacaggattaaggagctggggacgctcattccaaagtcaaatgac
cctgacatgcggtggaacaaaggcaccatcctgaaggcctcggtggagtacatcaggtgg
ctacagaaggagcagcagcattctagggaactcgaaagccgtcaaaagaagctggagcaa
gccaacaggaggctgctgctgaggatccaggagctggaaatccaggcacgagcacacgga
ctcccgaatatggctgctgccttggggacggttgaactgtcctcccacctgctcaaacag
cagcaacagcaatccccaccgcaggtacagcaacagcaaccacaacagccacccatctac
caggaggaccccaacagcgactacctccagaggatagccatggtgacgggcgtgccgtcc
atcgccaccgctagcggcccgcaggaccacatccagggcgccgatgcctgcaccacgttc
tccgacccgctctcccatttcacagacttcttcaccgccacgctcaaggaggagaaccag
ctggacgaaatcctgatggatgacccgctctcgcctttcggtgctgatccactcttgtcc
gccggatccccaggggctgcttccaaggacagcagccgaaggagtagcttcagctctgct
gaggccgacgacctataa
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