Xenorhabdus hominickii: A9255_08180
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Entry
A9255_08180 CDS
T04538
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
xho
Xenorhabdus hominickii
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xho03400
]
A9255_08180
DNA repair and recombination proteins [BR:
xho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
A9255_08180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
SLFN-g3_helicase
AAA_22
AAA_16
AAA_30
AAA
SNF2-rel_dom
TerL_ATPase
Lipase_GDSL_2
zf-tcix
TniB
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AOM42835
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Position
1667553..1669310
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AA seq
585 aa
AA seq
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MAFTLRPYQQEAVDATIHYFRQHQDPAVIVLPTGAGKSLVIAELAKRAHGRVLALAHVKE
LVAQNYSKYCAYGLNADIFSAGLNQKQSEGKVVFGSIQSISRNLDRFDHHFSLLIIDECH
RINDDKNSQYQQIIQQLRKNNPQIRILGLTATPYRLGAGWIYQYHYHGMIRGDESSFFRD
CIYELPLRYMVKHHFLVSPERLDMPVLQYDFSQVRTSQQGIFNETELNREIKRQKRITPH
IIRQIIEYAQARKGVMIFAATVEHAKEVFQLLPSGQAALVSADTPASERDLVITAFKEQQ
LLYMVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLFPDKKECLILDYAGNP
YDLYSPEVGISKPNSQSQPVQIFCPLCQFANTFWGKCTAEGELIEHFGRRCQGWEEDENG
KRQQCDFRFRFKSCPHCAAENDIAARRCHRCEEVLVDPDDMLKAALKLKDALVLRCGGMQ
LTPGHDNKGEWLKITYYDEDGADVSELFRLSTPAQKKVFELQFLRQHQRAPGIPFQWKTA
ADIIHQLPLLRHPDFVVARKKNQFWQIREKIFDYQGRFRLANDLY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcttttactttacgcccttatcaacaagaagcagtagatgcgactattcactatttt
cgtcaacatcaagatcctgcagtcattgttttaccaacaggtgcaggtaaaagccttgtc
atcgctgaattggcaaagcgggctcatggccgcgttctagcacttgcacatgtcaaagaa
cttgttgcacagaattacagtaaatattgtgcttatggactgaatgcggatattttttca
gcgggactaaatcaaaagcaaagtgaaggaaaagttgtttttggtagcatccagtccatc
tctcgcaatctggatcgctttgatcatcatttctcattgctcattattgatgaatgtcat
cgcatcaatgatgataaaaacagccaataccaacaaatcatccagcagctgcgaaaaaat
aaccctcaaatacgtatcttgggtttaaccgcaacaccttatcgtttaggtgccggttgg
atatatcaataccattaccatggtatgatccgtggtgatgaaagcagtttttttcgcgat
tgtatttatgagctcccattgcgctatatggtcaagcaccactttctggtttctccagaa
aggctggacatgcccgtcctgcaatatgatttcagtcaggtacgcaccagtcaacaaggg
atattcaacgagactgagctgaatcgggagatcaaacgccaaaaacgcattacaccccat
atcatcaggcaaattatcgaatatgcccaagctcgaaaaggtgtaatgatttttgccgct
acagtcgaacacgccaaagaagtttttcaattgcttccttctggtcaagcagcgttagtc
agtgctgatactcccgcatctgaacgcgatctcgtgatcaccgcattcaaagaacagcag
ctcctctatatggtcaacgtagccgtgctcacaacaggtttcgatgcacctcatgtcgat
ttaatcgccatattgcgaccaacagaatctgtcagtctctaccagcagatcgttgggcgt
gggttgcgtttatttcctgataaaaaagagtgcctgattctggattatgcaggcaatccc
tacgatctttactcgcccgaagtaggtatcagcaaacccaactcacaaagccagcctgta
cagatattttgtcccctctgccaatttgccaatactttttggggaaaatgcaccgcagaa
ggagagctcattgagcactttggacgacgttgccaaggctgggaagaggacgaaaacggg
aaaaggcagcaatgcgatttccgctttcgtttcaaatcatgcccacattgtgctgcagaa
aacgatatcgctgcccgacgctgccatcgctgtgaagaagtgttggtcgatcccgatgat
atgctgaaagccgccctgaaactgaaagatgctttggtactacgttgcggtggaatgcaa
ttaacaccaggtcatgataacaaaggggaatggctgaaaatcacttattacgatgaagat
ggcgcagatgtatcagaattgttccgtttatccactccggctcaaaaaaaagtatttgaa
ctacaattccttcgccagcaccaacgtgcaccgggcataccttttcaatggaaaacagcg
gcagatattattcatcaacttcctttattacgacatcctgattttgtcgtcgcccgcaaa
aaaaatcaattttggcagattcgggaaaagatttttgattatcaaggacgatttagactg
gctaatgatctgtattaa
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