Xenorhabdus hominickii: A9255_16690
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Entry
A9255_16690 CDS
T04538
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
xho
Xenorhabdus hominickii
Pathway
xho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9255_16690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xho03021
]
A9255_16690
03400 DNA repair and recombination proteins [BR:
xho03400
]
A9255_16690
Enzymes [BR:
xho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A9255_16690
Transcription machinery [BR:
xho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A9255_16690
DNA repair and recombination proteins [BR:
xho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A9255_16690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AOM42052
UniProt:
A0A2G0QFN4
LinkDB
All DBs
Position
3657803..3662029
Genome browser
AA seq
1408 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTSLERAQILTEEQYLDALEEFGDEFDAKM
GAEAIQDLLKNLDLENECETLREELNETNSETKRKKLTKRIKLLEAFIQSGNKPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLSGPKEAERVYRAG
LASLHARVKVRITEEVRDGEGNVTTNTGLVDTTVGRAILWMIVPRGLPYSLINQALGKKA
ISRMLNTCYRVLGLKPTVILADQTMYTGFAYAARSGVSVGIDDMVIPEKKEGIIAEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSSETVINRNGEEEQQVSFN
NIFMMADSGARGSAAQIRQLAGMRGLMATPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHDGILMTPVIEGGDVKEPLRERVL
GRVTAEDVLKPGTADILVERNTLLNEKWCDLLEENSVDSVKVRSVVSCETDFGVCANCYG
RDLARGHRINKGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVRNKGHLKL
FNAKFVTNSAGKLVITSRNTELRLIDDFGRTKESYKVPYGSVLAKGDGETVTGGETVANW
DPHTMPVVSEVSGIIQFYDMVDGQTITRQTDELTGLSSLVVLDSAERTGSGKDLRPALKI
VDAQGNDVLIAGTDMPAQYFLPGKAIVQLEDGMTISAGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVISPLDGSDAYEEMIPKWRQLNVFE
GEVVERGDVISDGPESPHDILRLRGVHAVARYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKVTIASTGSSEFLEGEQVEYARVKVANRKLEQNDKVPATFHRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQSRIRRRHNNEVVE
APQVSVDEATANLAELLNAGFGSSSDKD
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattgaagtttctgaaagcgcaaactaagaccgaagagtttgatgcgatc
aaaattgctctggcctctccagacatgatccgttcgtggtcattcggggaagtaaaaaag
ccggaaactattaactaccgtacgttcaaacctgaacgtgacggtcttttctgtgcgcgt
atcttcgggccagtaaaagattacgaatgcttgtgtggtaaatacaagcgtttgaaacac
cgtggtgtgatttgtgagaagtgtggcgtagaagttacgcaaactaaagttcgtcgtgac
cgtatgggacatatcgagctggcttctccaacggctcacatctggttcctgaaatccctg
ccatctcgcatcggtttgttgctggacatgcctctgcgtgacattgaacgcgtattgtac
ttcgaatcctatgtggttgttgaaggcggaatgaccagtcttgagcgtgctcagatcctg
accgaagaacaatatctggatgcgctggaagagttcggtgatgaatttgacgcaaaaatg
ggcgcggaagcgatccaagatttgctgaaaaatctcgacctagaaaatgaatgtgaaacc
ttgcgtgaagagttgaacgaaaccaactctgaaactaaacgtaagaagctgaccaaacgt
attaaactgttggaagctttcattcagtctggtaacaaaccagagtggatggttttgacc
gttctgccagttctgccaccggatttgcgtccattggttccgctggatggtggtcgtttc
gcaacttcagatctgaacgatctgtatcgtcgcgtaatcaaccgtaacaaccgtctgaaa
cgcctgctggatctggctgcgccagacatcatcgtacgtaacgaaaaacgtatgttgcag
gaagcggttgatgcgttgctggataacggtcgccgcggtcgtgcgattactggttctaac
aaacgtcctctgaaatccttggcagacatgatcaagggtaaacaaggtcgtttccgtcag
aacctgctgggtaaacgtgtagactactcaggccgttctgtaattaccgtaggtccatac
ctgcgcctgcatcagtgtggtcttcctaagaagatggcactggagctgttcaaaccattc
atctacggcaagctagaactgcgtggtctggcaacgactatcaaagcagccaagaaaatg
gttgagcgtgaagaagccgttgtgtgggatatcctggatgaagtcattcgtgagcaccca
gttctgctgaaccgtgcaccgacccttcaccgtttgggtattcaggcatttgaacctgtt
ctgatcgaaggtaaagctatccagttgcacccattggtgtgtgcggcttataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgttgacactggaagcccagttggaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtctccagcgagtggtgaaccaatcatc
gttccatctcaggacgttgtattgggtctgtactacatgactcgtgactgtgttaacgcg
aaaggcgaaggcatggttctgagtggtcctaaagaagcagagcgcgtttaccgagcaggt
ctggcttctttgcacgctcgtgtcaaagttcgcatcactgaagaagtaagagatggcgaa
ggtaatgtcaccaccaatacaggtctggttgatactacagtcggtcgtgccatcctgtgg
atgattgtaccgagaggtttgccatactcactgattaaccaggcgctgggtaaaaaagca
atctctagaatgctgaacacctgttaccgcgtactgggtctgaagccaaccgttatctta
gcagaccagaccatgtatactggttttgcttacgctgcccgttctggggtatccgtaggt
atcgacgacatggttattcctgagaagaaagaaggcatcatcgcggaagcggaagcagaa
gtggccgaaattcaggaacagttccaatcaggtctggtaactgctggcgaacgctataac
aaagttatcgatatctgggccgcagcgaacgaacgtgttgctaaggcgatgatggaaaac
ttgtctagtgaaactgttattaaccgtaacggtgaagaagaacagcaagtttccttcaat
aatatctttatgatggctgactccggtgctcgtggttctgctgctcagatccgtcagttg
gcgggtatgcgtggcttgatggcaacaccagatggctccatcatcgaaacgccaatcacg
gcgaacttccgtgaaggtctgaacgtacttcagtacttcatctcaacccatggtgctcgt
aaaggtcttgcggataccgcattgaaaacggcgaactccggttacttgacccgtcgtctg
gttgatgttgcccaagacttggtcgtaactgaagatgactgtggaactcacgacggtatc
ctgatgactccggttatcgaaggtggcgacgttaaagaaccgctgcgtgagcgcgtattg
ggtcgtgtgacggctgaagacgttctaaaaccaggtacggcagacattctggttgaacgt
aacactctgttgaacgaaaaatggtgtgatctgttagaagaaaactccgttgacagcgtg
aaagtacgttcagtagtaagctgtgaaactgacttcggtgtttgtgcgaactgttacggt
cgcgaccttgctcgtggtcaccgcatcaacaaaggtgaagcagttggtgttatcgcggca
cagtcaatcggtgagccgggtacacagctgacgatgcgtacgttccatatcggtggtgcg
gcatctcgtgcggcagcagaatctagcatccaagtacgtaacaaaggccatttgaaactg
ttcaacgctaagtttgttactaactcagcgggcaaactggttattacttcccgtaatacc
gaattgcgtctgatcgatgacttcggccgtaccaaagaaagctataaagtgccttacggc
tcagtattggcgaaaggtgatggtgaaacagtaactggcggtgaaaccgttgcgaactgg
gatccacataccatgccagtcgtgagtgaagtctccggtatcatccagttctatgacatg
gttgatggtcagactatcacccgtcagacggacgaattgactggtctgtcttcactggta
gttctggacagtgcagaacgtactggtagcggtaaagacctgcgtccagcactgaaaatt
gttgatgcccagggtaacgacgttctgatcgccggtacagatatgcctgctcagtacttc
ctgccgggtaaagcgattgttcagctggaagatggcatgaccatttctgcgggtgatacg
ctggcgcgtattcctcaggaatctggcggtactaaagatattaccggtggtctgccacgc
gttgctgacttgttcgaagcacgtcgtccgaaagaacctgctatcttggcagaaatcagc
ggtattgtttccttcggtaaagaaaccaaaggcaaacgccgtctggttatcagcccactg
gatggctctgatgcttacgaagagatgatccctaaatggcgtcagctcaacgtgttcgaa
ggtgaggttgttgaacgtggtgacgtgatctccgatggcccagaatctccacatgacatt
ctgcgtctgcgtggtgttcatgcagttgcccgttacatcaccaacgaagtacaggaagtt
taccgtctgcaaggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatg
ctgcgtaaagtgacaatcgcaagcacgggaagctctgaattcctcgaaggcgagcaggtt
gaatacgcacgcgttaaagttgcaaaccgtaagttggagcagaatgacaaagtacctgca
accttccaccgtgatctgttgggtatcaccaaggcatcactggcaacggaatccttcatc
tctgcggcgtcgttccaggaaacaacccgcgtactgactgaagccgctgttgcaggtaaa
cgtgatgaactgcgtggcttgaaagagaacgtgattgttggtcgtttgatccctgcaggt
acaggttatgcttaccatcagtctcgtatccgtcgtcgtcacaacaacgaagtggtcgaa
gcaccacaagttagcgttgacgaagcaactgcaaaccttgctgaacttttgaatgcaggt
tttggtagcagcagcgataaagactaa
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integrated database retrieval system
