Xanthomonas hortorum: XJ27_11890
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Entry
XJ27_11890 CDS
T05082
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xhr
Xanthomonas hortorum
Pathway
xhr00040
Pentose and glucuronate interconversions
xhr01100
Metabolic pathways
xhr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XJ27_11890
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XJ27_11890
Enzymes [BR:
xhr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
XJ27_11890
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ASW46580
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All DBs
Position
complement(2710364..2711497)
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AA seq
377 aa
AA seq
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MKPKFSTAAAASLFVGSLLVVGVACADPALEVATTGWATQNGGTKGGSKAAAANIYTVKN
AVELKNALKASVGSNGRVIKISGIIDVSEGKPYTKTSDMKARARLDVPTKTTLIGITSNA
EIREGYFYVKANDVIIRNLTIENPWDPEPVWDPDDGSAGNWNAEYDGLTVEGATNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDVKKGANFVTISYSAFKSHEKNDLIGSSDSAS
STDSGKLKATIHNTLFENISARAPRVRFGQVHLYNNYHVGSTTHPVYKFSHAHGVGKESK
IFSERNAFDISGVSGCDKIAADYGGSVYRDQGSLLNGKALTCTWNTNIGWTPPYTYKLLS
ADKVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcaacggcggccgccgcgtcgctgtttgtcgggtcgttgctggtc
gttggcgttgcctgcgccgatcctgcactggaagttgcaaccactggttgggcaacacag
aacggtgggaccaaaggcggctccaaagcggccgctgccaacatctacacggtcaagaat
gccgtcgagctgaagaacgcgctgaaggccagcgtgggcagcaacggacgcgtcatcaag
atcagcggcatcatcgatgtcagtgaaggcaagccctacaccaagacctcggatatgaag
gcgcgcgcgcgtttggacgtgcccaccaagaccacgttgatcggcatcaccagcaacgcg
gaaattcgtgagggctatttctacgtcaaggccaacgacgtcatcattcgcaatctcacc
atcgaaaatccgtgggatccggaaccggtctgggatccggacgatggcagcgccggcaac
tggaatgccgagtacgacggcttgacggtggaaggtgccaccaacgtgtgggtggaccat
gtcaccttcaccgatggtcgccgtaccgacgatcagaacggcaccgccaatggccgcccc
aagcagcatcacgatggcgcgatggacgtcaagaaaggcgccaacttcgtgacgatttcc
tactcggcgttcaagtcgcacgagaagaacgatctgatcggttccagcgacagcgcctcc
agtaccgacagcggcaagctcaaggcgaccatccacaacaccttgttcgaaaacatctcc
gcacgtgcgccgcgggtgcgcttcggccaggtgcatctgtacaacaactaccacgttggc
agcaccacccatccggtctacaagttctcgcacgcgcatggtgtgggcaaggaatcgaag
atcttctccgagcgcaatgcgttcgatatcagcggtgtgagcggctgcgacaagatcgcg
gccgattacggcggcagcgtgtaccgcgatcagggctcgctgctcaatggcaaggcgctg
acctgcacgtggaataccaacatcggttggacgccgccgtacacctacaaactgctgtcg
gccgacaaggtcgctgcagacgtcaaggcaaaggccggtgcaggcaagctgtaa
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