Xanthomonas hyacinthi: FZ025_05520
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Entry
FZ025_05520 CDS
T06345
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy00521
Streptomycin biosynthesis
xhy00523
Polyketide sugar unit biosynthesis
xhy00541
O-Antigen nucleotide sugar biosynthesis
xhy01100
Metabolic pathways
xhy01110
Biosynthesis of secondary metabolites
xhy01250
Biosynthesis of nucleotide sugars
Module
xhy_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FZ025_05520 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FZ025_05520 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FZ025_05520 (rfbC)
Enzymes [BR:
xhy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FZ025_05520 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QGY76151
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Position
complement(1198059..1198616)
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AA seq
185 aa
AA seq
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MKVIETALPGCLVIEPVVHSDARGFFFESWNAEPFAAKGLPTRFVQSNFSSSARRVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDIRRGSPHFGRWTAAVLSGENRRQLWIPEGFAHGFA
VLSERAVFHYLCTDVYLKEADAAIRWNDDLIAVDWPIGEPVLSDKDRAAPLFGDVPRDRL
PDYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggtgatcgagaccgcgttgccgggatgtctggtcattgagccggtcgtccactcc
gacgcgcgcgggttcttcttcgagtcctggaatgccgagcccttcgctgcgaaggggctg
cccacgaggtttgtgcaaagcaacttttcctcatcggcccgcagggtgctgcgcggtctg
cattaccagtggccccgcccgcagggcaagctcgtcagcgtgctcgaaggcgaagtctac
gacgtggccgtggacatccggcgcggttctccccatttcgggcggtggaccgcggccgtg
ctgagtggcgagaaccgccgccagctctggattcccgagggcttcgcccacgggttcgct
gttttgtcggagcgtgcggtcttccattacttgtgcaccgatgtgtacttgaaggaggcg
gatgccgctatccgctggaatgatgacttgattgccgtggactggccgattggcgagccg
gtgctgtcggacaaggaccgggccgccccgttgttcggggatgtgccgcgagatcgcctg
cccgactacacgccatga
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