Xanthomonas hyacinthi: FZ025_06580
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Entry
FZ025_06580 CDS
T06345
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xhy
Xanthomonas hyacinthi
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhy03032
]
FZ025_06580
03400 DNA repair and recombination proteins [BR:
xhy03400
]
FZ025_06580
Enzymes [BR:
xhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FZ025_06580
DNA replication proteins [BR:
xhy03032
]
Prokaryotic type
DNA Topoisomerases
FZ025_06580
DNA repair and recombination proteins [BR:
xhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FZ025_06580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
PGM_PMM_IV
Toprim_2
Cdh1_DBD_1
Motif
Other DBs
NCBI-ProteinID:
QGY76350
LinkDB
All DBs
Position
1437688..1440174
Genome browser
AA seq
828 aa
AA seq
DB search
MSKHLLIVESPAKAKTINKYLGKDFHVLASYGHVRDLIPKEGAVDPDDGFAMRYALIEKN
EKHVEAIAKAAKIAEDIYLATDPDREGEAISWHIAEILKERGLLKDKPLHRVVFTEITPR
AIKEAMANPRQIAVDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWSIGADCLHPSQPFAAKLVKLDGQKFEQFTITDGDTAEAARMRLQK
AAQGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTSRTMRVAQKLYEGVTLGEE
GTVGLISYMRTDSVNLSQDALAEIRDLIARDFGTGALPDKSNMYQTKSKNAQEAHEAIRP
TSALRTPAQMAKYLDEDGRRLYELIWKRAVACQMVPATMNTVTVELAAGNEHSFRASGTT
VIDPGFLAVYEEGKDQKAAEDEDEGRKLPPMKPGDRIPLDRIHTDQHFTEPPPRFSEALL
VKTLEEYGIGRPSTYASIIQTLLFRKYVELDARRFRPSDVGRAVSKFLSGHFTRYVDYDF
TAKLEDELDAVSRGEEEWRPLMEKFWGPFKELVEEKKESVDRSEATGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEDKPKFASLRPGQSMHTITLEDALELFLMPRALGEDKGE
EVSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFAGSDI
QVLNGRFGPYISDGKLNGKIPKDREPATLTLEEVQKLLEETGKPARRGFGAKKAAAKKEA
APKKSAAKKAAADAPAKPAAKKAVKKAAKKTVKKAVKKVVEKAAARRA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggacttccacgtcctggcctcgtatgggcacgtgcgcgacctgatcccgaag
gagggcgcggtggatccggacgacggcttcgcgatgcgctacgcgctgatcgagaagaac
gagaagcacgtcgaggccatcgccaaggccgccaagatcgccgaggacatctatctggcg
accgacccggaccgcgagggcgaagcgatcagctggcacatcgccgagatcctgaaggag
cgcgggctgctcaaggacaagccgctgcaccgggtggtgttcaccgaaatcaccccgcgc
gcgatcaaggaggcgatggccaacccgcgccagatcgccgtggacctggtcgatgcgcag
caggcgcggcgcgcgctggactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgccggccgcgtgcagtcaccggcgctgcgcatgatcgtc
gagcgcgaggaggagatcgaagccttcgtcgcccgcgaatactggagcatcggcgccgac
tgcctgcatccctcgcagccgttcgcggccaagctggtcaagctcgacgggcagaagttc
gaacagttcaccatcaccgatggcgacaccgccgaagcggcgcggatgcgcctgcagaag
gccgcgcagggcgcgctgcacgttaccgacgtggccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccacgctgcagcaggaggcctcgcgcaagctcggcttcacc
accagccgcaccatgcgcgtggcgcagaagctgtacgagggcgtgaccctgggcgaggaa
ggcacggtcggcctgatcagctacatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggccgagatccgcgacctgatcgcgcgcgacttcggcaccggcgcgctgccggacaag
tcgaacatgtaccagaccaagtccaagaacgcgcaggaagcgcacgaagcgatccgcccg
accagcgcgctgcgtaccccggcgcagatggccaagtacctggacgaggacggccgccgc
ctgtacgagctgatctggaagcgcgccgtggcctgccagatggtgccggcgacgatgaac
accgtcaccgtggaactggccgccggcaacgagcacagcttccgcgccagcggcaccacg
gtgatcgacccgggttttttggccgtgtacgaggaaggcaaggaccagaaggccgccgag
gacgaggacgagggccgcaagctgccgccgatgaagcccggcgaccgcatcccgctcgac
cgcatccataccgaccagcatttcaccgagccgccgccgcgcttttcggaagccttgctg
gtcaagacgctcgaggaatacggcatcggccgtccgtcgacctacgcctcgatcatccag
accctgctgttccgcaagtacgtggaactggacgcgcgccgcttccgtccgtcggacgtg
ggccgcgcggtcagcaaattcctgtccggccacttcacccgctacgtcgactacgacttc
accgccaagctcgaggacgagctggacgcggtgtcgcgcggcgaagaggaatggcggccg
ctgatggagaagttctggggtccgttcaaggaactggtcgaggagaagaaggaatcggtg
gaccgctccgaagccaccggcgcgcgcgaactcggcaccgaccccaagaccggcaagccg
gtcagcgtgcggctgggccggttcggaccgtacgcggcgatcggcagcaccgccgaggac
gccgaggacaagcccaagttcgcctcgctgcggccgggccagagcatgcacaccatcacc
ctggaagacgcgctggagctgttcctgatgccgcgcgccttgggcgaggacaagggcgag
gaggtcagcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcgtctatgcc
tcgctgaagaaggaagacgacccgtacaccatcgacctggcgcgcgcggtgttcctgatc
gaagagaaggaagagatcgcgcgcaaccgcatcatcaaggaattcgccggcagcgacatc
caggtgctcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatc
cccaaggaccgcgagccggccacgctgaccctggaagaagtgcagaagctgctggaagag
accggcaagccggcacggcgcggcttcggcgcgaagaaggccgcggccaagaaggaagcg
gcgccgaagaagagcgcagccaagaaggccgcggccgacgccccggccaagcccgcggcg
aagaaggcggtcaagaaggcggcgaagaagaccgtgaagaaagcggtcaagaaagtagtc
gagaaggccgccgccaggcgcgcttga
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