Xanthomonas hyacinthi: FZ025_21300
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Entry
FZ025_21300 CDS
T06345
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy01501
beta-Lactam resistance
xhy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FZ025_21300
01503 Cationic antimicrobial peptide (CAMP) resistance
FZ025_21300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhy02000
]
FZ025_21300
01504 Antimicrobial resistance genes [BR:
xhy01504
]
FZ025_21300
Transporters [BR:
xhy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FZ025_21300
Antimicrobial resistance genes [BR:
xhy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FZ025_21300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF485
Motif
Other DBs
NCBI-ProteinID:
QGY79019
LinkDB
All DBs
Position
complement(4820718..4823867)
Genome browser
AA seq
1049 aa
AA seq
DB search
MARFFIDRPIFAWVLAIIVMLAGILSVVTLPIAQYPSIAPPAVAITANYPGASAKTLEDT
VTQVIEQKMKGLDHLSYMASTSESSGQVTITLTFDNGTDPDTAQVQVQNKLSLATPLLPQ
EVQQQGVTVTKSATNFLNVLAFTSEDGSMSDSDLSDYVAANVQETISRVEGVGDTTLFGS
QYSMRIWLDPNKLSNFSLTPLDVKTAVQAQNAQVSAGQLGALPAAANQQLNATITAQTRL
KTAAEFEDILLRTQSDGSQVRLRDVARIELGSESYNSVGRYNGKPAAGLAIKLATGANAL
DTVKAIDASIAEQEKFFPPGMKVQKPYDTTPFVRISIEEVVRTLIEAVVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFGVLAVFGFTINTLTMFAMVLAIGLLVDDAIVVVENVERVM
NEERLPPKEATRKSMGQITGALVGVALVLAAVFVPMAFFGGSTGVIYRQFSITIVAAMTL
SVLVAMVLTPALCATLLKPAKQHGMATTGFFGWFNRMFDRGNGRYQGIVRHMLGKGWRYM
LAYAVVLALVVVGFMKLPVGFLPDEDQGTLFVLMQLPPGATAARTDAVIRQVEQHFLVEQ
KDSVAGVFAVSGFSFAGSGQNLGLAFVKLRPWDERTGKGQSVTAVAARAGAFFAAIRDAK
VFAFAPPAVSELGNATGFDLMLQDRANLGHAALMQARNQLLAELSQDKRLVAVRPNGQED
TPEFKLDIDAHKAETLGLSIADINGTFSSAWGSTYVNDFIDKGRVKKVMLQADAPYRMLP
DDIDRWYVRNSAGTMVAFSSFAKASWTNGSPRLERYNSVPSVEILGMALPGAASSGQALA
IVEAAAAKLPPGIGFEWTGLSRQEKASSGQTGMLYGLSILIVFLCLAALYESWAIPFAVI
LVVPLGVFGALLGAVLTWKMNDVYFQVGLLTTIGLACKNAILIVEFARELHESGKSLLEA
ALEAARMRLRPILMTSMAFILGVMPMVLGSGAGAGAQHALGTAVIGGMLSGTILAIFFVP
LFFVLVCGLFKRRAGNPDDPSAARVAEGA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttcttcatcgatcgtccgatcttcgcctgggtgctggccatcatcgtgatg
ctggccggcatcctctccgtcgtcaccttgcccatcgcgcaatacccgagcatcgcgccg
cccgccgtggcgatcaccgccaactatcccggcgcctcggccaagaccctcgaggacacc
gtcacccaggtcatcgagcagaagatgaagggcctggaccacctgagctacatggcctcc
accagcgagtccagcggccaggtcaccatcaccctgaccttcgacaacggcaccgacccg
gacaccgcgcaggtgcaggtgcagaacaagctgtcgctggccacgccattgctgccgcag
gaagtgcagcagcagggcgtgaccgtgaccaagtcggcgaccaacttcctcaacgtgctg
gcgttcacttccgaagacggcagcatgagcgattcggacctgtccgactacgttgcggcc
aacgtgcaggaaacgatcagccgcgtcgagggcgtcggcgacaccaccctgttcggttcg
cagtattcgatgcggatctggctggaccccaacaagctgagcaacttcagcctgaccccg
ctggacgtgaagaccgcggtccaggcgcagaacgcgcaggtctcggccggccagctcggc
gcgctgccggccgccgccaaccagcagctcaacgccaccatcaccgcgcagacgcggctg
aagaccgccgcggagttcgaggacattctgctgcgcacgcagtccgatggctcgcaggtg
cggttgcgcgacgtggcccggatcgagctgggcagcgagagctacaacagcgtcggccgc
tacaacggcaagcccgccgccggcctggcgatcaagctcgccaccggcgccaacgcgctg
gacacggtgaaggcgatcgacgccagcatcgccgagcaggagaagttcttcccgcccggc
atgaaggtgcaaaagccgtacgacaccacgccgttcgtgcgcatctcgatcgaagaggtg
gtgcgcaccttgatcgaggcggtggtgctggtgttcctggtgatgtacctgttcctgcag
aacttccgcgccacgctgatcccgaccatcgccgtgccggtggtgctgctgggcaccttc
ggcgtgctggccgtgttcggcttcaccatcaacacgctgaccatgttcgcgatggtgctg
gcgatcggcctgctggtggacgacgcgatcgtggtggtggagaacgtcgagcgggtgatg
aacgaggagcggttgccgcccaaggaggccacgcgcaagtcgatgggccagatcaccggc
gcgctggtcggcgtggccctggtgctggcggcggtgttcgtgccgatggcgttcttcggc
ggctccaccggggtgatctaccggcagttctcgatcaccatcgtggcggcgatgaccctg
tcggtgctggtggcgatggtgctgaccccggcgctgtgcgccaccttgctcaagccggcc
aagcagcacggcatggccacgaccggtttcttcggctggttcaaccgcatgttcgatcgc
ggcaacggccgctaccagggcatcgtgcggcacatgctgggcaagggctggcgctacatg
ctggcctacgcggtggtgctggcgctggtggtggtcggcttcatgaagctgccggtcggg
ttcctgccggacgaggaccagggcacgctgttcgtgctgatgcagttgccgccgggcgcc
actgcggcgcgcaccgatgcggtgatccgccaggtcgagcagcatttcctggtcgagcag
aaggactcggtggccggcgtgttcgctgtgtccggcttcagtttcgccggcagcgggcag
aacctgggcctggccttcgtcaagctgcggccgtgggacgagcgcaccggcaagggccag
agcgtgaccgcggtggcggccagggcgggcgcgttcttcgccgccatccgcgacgccaag
gtgttcgcgttcgcgccgccggcggtgtcggaactgggcaacgccaccggcttcgacttg
atgctgcaggatcgcgccaatctcggccacgccgcgctgatgcaggcgcgcaaccagttg
ctggccgagctgtcgcaggacaagcggctggtggcggtgcgcccgaacgggcaggaggac
acgcccgagttcaagctggacatcgatgcgcacaaggccgaaacgctcggcctgtcgatc
gccgacatcaacggcacgttctccagcgcctggggcagcacctacgtcaacgacttcatc
gacaagggccgggtcaagaaggtgatgctgcaggccgatgcgccgtaccgcatgctgccg
gacgacatcgaccgctggtacgtgcgcaacagcgccggcaccatggttgcgttcagttcc
ttcgccaaggccagctggaccaacggttcgccgcggctggagcgctacaacagcgtgccg
tcggtggagatcctgggcatggcgctgccgggtgcggcctccagcgggcaggcgctggcc
atcgtcgaggccgcggcagccaagctgccgccgggcatcggcttcgagtggaccgggctg
tcgcggcaggagaaggcgtccagcggccagaccggcatgctgtacgggctgtcgatcctg
atcgtgttcctgtgtcttgccgccctgtacgagagctgggcgattccgttcgcggtgatc
ctggtggtgccgctgggcgtgttcggcgcgctgctcggtgcggtgctgacctggaagatg
aacgatgtgtacttccaggtcggtctgctgaccacgatcggtctggcctgcaagaacgcg
atcctgatcgtggagttcgcccgcgaactgcacgagagcggcaagagcctgctggaggcg
gcgctggaagcggcgcgcatgcgcctgcggccgatcctgatgacctcgatggcgttcatc
ctcggcgtgatgccgatggtgctgggcagcggcgccggtgccggcgcgcagcacgcgctg
ggcaccgcggtgatcggcggcatgctgtcgggcacgatcctggcgatcttcttcgtgccg
ctgttcttcgtgctggtgtgcggcctgttcaagcgccgtgccggcaaccccgacgacccg
tccgccgcgcgcgtcgcggaaggagcctga
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