Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00141
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Entry
AMD24_00141 CDS
T04108
Symbol
nrnA
Name
(GenBank) Bifunctional oligoribonuclease and PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00920
Sulfur metabolism
xii01100
Metabolic pathways
xii01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
AMD24_00141 (nrnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xii03400
]
AMD24_00141 (nrnA)
Enzymes [BR:
xii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
AMD24_00141 (nrnA)
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
AMD24_00141 (nrnA)
DNA repair and recombination proteins [BR:
xii03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
AMD24_00141 (nrnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALJ56336
UniProt:
A0A0P0G735
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Position
complement(154451..155461)
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AA seq
336 aa
AA seq
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MSSALSNSPIPANVCFNQILSALHWARNILVTSHLRPDGDALGSAIASALWLRSLGKKVT
TWNEDGVPSRFHYLPFHSYVSIPPTDKHSFDGVIVLDSPTRGRLGRVLTAIKSAGILINI
DHHISNQRYGDLNYVDPSVPATGQILFDLFRYAEADFTPEISTNLYAAIATDTGSFQYTG
TSQHTFESAAYLVRSGVQVTKLSLAMYHNQPRRCFRLLQHALNNTKFSCNGTIAHFSLSL
SDLEHLQIFPEDNEGIIDHLRSVEDVMVALFFEELPGVRVRISARSKDARIDVCKICMRF
GGGGHPFASGACTHGSLSSIREKFLTATYHEIQGLT
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcactgtctaattctccaataccagccaatgtctgctttaaccagattcta
tccgctctccactgggctagaaatatcttagtaacaagtcacctaagaccagatggagac
gccttaggctctgctattgcctccgccctctggcttcgcagtctcggaaagaaagtaact
acttggaatgaagatggggtaccgagtcggtttcactatctcccctttcactcctacgtt
tctatacctcctacggacaagcattctttcgacggagtaatcgttcttgacagtcctact
cgtggtagattgggaagggtacttacagctatcaaatccgctggtatcctgatcaatatt
gaccatcatatcagcaaccaacgttatggggatctcaactatgtagatccttctgttccg
gctactggacagattctttttgacctcttccgctatgcggaagcggattttaccccagaa
atttctactaatctttatgctgctatcgccacagacactggttcctttcagtatacagga
acttctcaacacacttttgaatccgccgcatatctcgtgcgttcaggagtccaagttaca
aagctctctctggcaatgtatcacaaccaaccccggcgctgttttcgtcttcttcagcat
gcccttaataacaccaaattttcctgtaacgggaccattgctcacttttctctctctctt
tctgaccttgaacatcttcagattttcccagaagacaatgagggcatcattgaccattta
cgctccgtagaagatgttatggtggctctcttctttgaagaactacctggtgtcagagta
cgcattagtgcccgatcaaaagatgcacgcattgatgtgtgcaaaatctgcatgcggttt
ggtggtgggggtcacccgtttgcctcaggagcgtgcactcatggttctctgtcctctatt
cgagaaaaatttcttactgctacctaccatgaaatccagggtctcacttga
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