Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00603
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Entry
AMD24_00603 CDS
T04108
Symbol
galE_1
Name
(GenBank) UDP-glucose 4-epimerase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00053
Ascorbate and aldarate metabolism
xii00520
Amino sugar and nucleotide sugar metabolism
xii00541
O-Antigen nucleotide sugar biosynthesis
xii01100
Metabolic pathways
xii01240
Biosynthesis of cofactors
xii01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
AMD24_00603 (galE_1)
00520 Amino sugar and nucleotide sugar metabolism
AMD24_00603 (galE_1)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
AMD24_00603 (galE_1)
Enzymes [BR:
xii01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
AMD24_00603 (galE_1)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
KR
adh_short
NmrA
adh_short_C2
FERM_F1
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ALJ56770
UniProt:
A0A0N7IE95
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Position
complement(638524..639471)
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AA seq
315 aa
AA seq
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MRVLVTGGAGFIGSHLVSALSKEGHAVVILDNFNDFYAPSLKLVNVSSFSSQVKVVEGDI
CCSATVGALFTRWHFDSVVHLAAYAGVRPSVQYPTLYLKTNVDGTLQLLKAAHRAGVPKF
LFGSSSSVYGLKEKVPFSEGITLSQTLNPYAASKLVAEQLCRDFACLHGIHVVCLRFFTV
YGPAQRPDLAIYKFTQSISREVPIQKFGDGTTQRDYTYVDDVIQGILKALYYKGEVFEVF
NLGKSSTTTLNELIVTIEEALGKKALIRPLSEQNGDMPYTCADVSKARRLLGYQPQISIP
VGIKKFVSWYLEKVQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgttggtaacaggaggtgcggggtttataggttcgcatctggtgtctgccttg
tctaaggagggacatgcagtggtcattctagataactttaatgacttctatgcgccgagt
cttaaactcgtgaatgtttcctctttctcgagtcaagttaaagtggtggagggtgatatc
tgctgctcggctaccgtaggtgcgctttttacgcgttggcattttgactccgtggttcat
cttgcagcttacgctggagtacgtccctctgttcagtatccaacgctctacttgaagaca
aatgtcgacggtacgttacagcttttaaaggcagcgcaccgagcaggtgtacccaagttt
ttgtttggctcaagttcttctgtttatggtctgaaagaaaaggttcccttctccgaaggg
ataaccctttcgcaaacgcttaacccttatgcagctagcaagctcgttgctgaacagctc
tgcagagattttgcttgtctccatggcatacacgtggtttgcctacgattcttcactgta
tatggcccggcgcaacgtccagatcttgccatttataagttcactcagtctatttctaga
gaagttccaattcaaaagtttggtgacggcactacacaacgcgactacacttacgttgac
gatgtcattcaaggaatactgaaggctctgtattacaagggagaggtctttgaggtcttt
aatcttgggaagagtagtaccactaccctcaacgagctcatagtgaccatcgaagaagct
ctcggaaaaaaggcgcttatacggccactctccgaacaaaatggtgacatgccgtacaca
tgtgcagatgtctcaaaggcgcgtaggttgctcggctaccaaccacaaatcagcatccct
gtcggaatcaaaaaatttgtgagctggtacttggagaaggtgcaatga
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