Xenopus laevis (African clawed frog): 100380958
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Entry
100380958 CDS
T01010
Symbol
u2surp.S
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100380958 (u2surp.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
100380958 (u2surp.S)
Spliceosome [BR:
xla03041
]
Complex A
U2 snRNP components
U2 related factors
100380958 (u2surp.S)
Complex B
100380958 (u2surp.S)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
100380958
NCBI-ProteinID:
XP_018121273
Xenbase:
XB-GENE-866328
UniProt:
A0A1L8G4G9
A0A974CTZ5
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All DBs
Position
5S:107476208..107510655
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AA seq
966 aa
AA seq
DB search
MAEKTSGGSPRAGQKPSFLESKLKSFSIGKMSTAAKRTLSKKEQDELKKKEDEKAAAEIY
EEFLAAFEGGDGSKVKTFVRGGIVNATKEEHEADEKRGKLYKPSTRFSEPKSQQSSSERP
PPPVILGEPRKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRTSRFEPPQTDT
DTQRKLTDTPSSRRSRSSGALDDYAPGSHDVGDPSTTNIYLGNINPQMNEEMLCQEFGRF
GPLASVKIMWPRTDEERARERNCGFVAFMNRKDAERALKNLNGKMVMNFEMKLGWGKAVP
IPPHPIYIPPSMMEHTLPPPPSGFPFNAQPRERLKNPNAPMIPLPKNKDDFEKTLSQAIV
KVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQAPAHVYYRWKL
YTILQGDSPTKWKTEDFRMFKNGSFWRAPPLNPYLHGMAEEQEAEPFVEEPIKKGSLKEE
QRDKLEEILRGLTPRKNDIGEAMAFCLNHAEAAEEIVDCVTESLSILKTPLPKKIARLYL
VSDVLYNSSAKVANASYYRKYFEAKLCQIYADLNAAYRAIQGHLQSENFKQRVMACFRAW
EDWAIYPEPYLIRLQNIFLGLVNIEENEPEDVPDDLDGAPIEEELDGALIEDVDGIPIDG
APLDDLDGVPIKPMEDDLDGVPLDITDDAKKNEPIFKVAPSKWEAVDESELESQAVTTSK
WETFDQHEESEEEENPNQEEDSEDEEDTPSSKSEDQHYYSNPIRDEMSDSKSMKYSEMSE
EKRAKLREIELKVMKFQDEIESGKRPKKPGQSIQEQVEHYRDKLLQREREKELERERDKR
DKDKADYRTKEKKDKDESTPTRKERKIRHSGSVSPTRSSSSRRGKSPSPKSERSERSHKD
GSRSRSSHKDSPRDVTKKPKRSPSGSRTPKRSRRSRSRSPKKSVKKPRSQSRSPHRSHKK
SKKSKH
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagacgtctggcggctcgccacgagcggggcagaagccatcttttttggaa
agtaaacttaaatccttcagtattgggaaaatgagcactgctgctaagagaacgttaagc
aagaaggagcaagatgaacttaagaaaaaggaagatgaaaaagcagctgcagagatatat
gaagaattccttgctgcatttgaaggaggtgatggcagcaaagtgaaaacatttgtaaga
ggagggattgttaatgccacaaaagaggaacatgaagcagacgagaagcgaggaaaattg
tataagccatctacacgattttcagaacccaaaagccagcagtctagcagcgagaggccc
ccacctccagttattcttggtgaacccagaaaacctccgttaaagaaaggggaaaaagaa
aagaagaaaagtaatttggaacttttcaaagaagagctgaagcaaatacaggaggagaga
gatgaacgtcacaaaactaaaggtagaacgagtaggtttgaaccccctcaaactgacaca
gatacgcaacggaaattaacggacacaccatcatcaagaagaagcagatcttctggtgcc
cttgatgattatgctcctgggtcacatgatgttggagatccaagcaccactaacatatat
cttggaaatatcaatcctcagatgaatgaagaaatgttatgtcaggaatttgggcgtttt
gggccattggctagtgtcaaaattatgtggccacgaaccgacgaggagagggcacgtgag
agaaattgtggctttgtagcattcatgaacagaaaggatgctgaaagagctttaaaaaac
ttaaatgggaaaatggttatgaactttgagatgaaactgggatggggaaaggctgtacct
attcctccccacccaatatatattcctccgtccatgatggaacacacccttccaccccct
ccttctggttttccgtttaatgcccaacctagagagagactgaagaaccccaatgctccc
atgattccacttccaaaaaataaggatgattttgagaagactctgtcgcaagccatagtc
aaagtggttatcccaacagaaaggaatttactcgctttgatacatcggatgatcgagttt
gtggtgcgtgaagggccaatgtttgaagctatgatcatgaacagagaaatcaacaatcca
atgtttcggtttctgtttgaaaatcaggcaccagctcacgtttattacaggtggaaactt
tatacaatattacagggtgactccccaacaaaatggaaaacagaagacttcagaatgttc
aaaaatggctcattctggagggctccacccttgaatccatacctacatggaatggctgaa
gagcaggaagctgagccttttgttgaagaaccaatcaaaaagggctcccttaaggaagaa
caaagggataaactggaagaaatcttacgagggctaactccaagaaaaaatgacattggc
gaggctatggcattctgcttgaatcatgctgaggctgctgaagaaattgtagactgtgta
acggagtctttgtctatcttaaaaaccccactccctaaaaagattgccagactttatcta
gtgtcagatgttctatataattcttcagctaaagttgccaatgcttcatactacagaaaa
tactttgaagcaaagttatgccaaatctatgctgatctaaatgctgcttacagagctata
caaggtcacttgcaatcagaaaattttaaacaacgtgtcatggcttgcttccgtgcatgg
gaagactgggcaatttatcccgagccttacttaatcagattacaaaacattttcctggga
cttgtaaatattgaagaaaatgaaccagaggatgttccagatgatttggatggtgctcca
attgaagaagagctggatggagcacttattgaggatgttgatggaattccaattgatggt
gctcctcttgatgacttggatggtgttcccattaagcctatggaagatgatttggatggt
gtaccattggacattactgatgacgctaagaaaaatgaacccatttttaaagttgcacct
tccaagtgggaagcagtagatgaatcagagcttgaatcacaagcagttacaacatcaaaa
tgggaaacatttgaccagcatgaagagtctgaagaagaagaaaatcccaaccaagaggaa
gacagtgaagatgaagaggacacaccgagctccaaatctgaggatcagcattattactca
aaccccatcagagatgaaatgtctgattctaaatccatgaaatactctgaaatgagcgaa
gagaaacgtgcgaaactcagggaaatagagctgaaagtaatgaaatttcaagatgaaatt
gagtctggaaaaagaccaaagaaacctggacagagtattcaagaacaagttgaacactat
cgagacaagcttcttcagagggaaagagaaaaagagcttgaaagggagagggacaaaaga
gataaagacaaggctgattatcggacaaaagaaaagaaggacaaagatgaatctactcct
acaagaaaagagaggaaaatacgccacagtgggtctgtaagcccaacacgaagtagtagc
agcaggcgagggaagtccccttcaccaaaatcagagcgatcggaaagatcccataaagat
ggttctcgttccaggtcttctcataaagactcacccagggatgtcacaaaaaagcccaaa
aggtcaccttctggctctaggacaccgaaaaggtctcgacggtctcggtcaaggtcaccc
aaaaagtctgtaaaaaaacccagatctcagtctagatcccctcacagatctcacaagaag
tccaagaaaagcaaacactga
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