Xenopus laevis (African clawed frog): 108696192
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Entry
108696192 CDS
T01010
Symbol
pcgf5.L
Name
(RefSeq) polycomb group RING finger protein 5 isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108696192 (pcgf5.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108696192 (pcgf5.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
108696192 (pcgf5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-RING_10
zf-Nse
zf-rbx1
zf-RING_6
zinc-ribbons_6
TRAF3_RING
DUF1272
Prok-RING_4
DZR_2
Motif
Other DBs
NCBI-GeneID:
108696192
NCBI-ProteinID:
XP_018080814
Xenbase:
XB-GENE-6489206
UniProt:
A0A1L8FJL8
A0A974CEM0
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Position
7L:33284490..33342922
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AA seq
261 aa
AA seq
DB search
MATQRRRFVKEFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEESNDCPKCGNQV
HETNPLEMLRLDNTLEEIIFKLVPGLREGEQNRELEFWKRKQPQENGDDGVVNVKRHRDD
EEENDEDRDYHRSDPQIAICLDCLRNNGQSGDNIVKGLMKKFIRCSTRVTVGTIKKFLSL
KLKLPSTYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFQYEKSSTSLHMSLTETARGV
SEASTISYPMVLQYRPRIDFG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccaaaggaggcgctttgtaaaagaatttaatcctcacatcacatgctacatc
tgcaaaggttatctgattaagccaaccacagtcacagagtgcctgcatacattttgtaag
acttgcattgttcagcatttcgaagaaagtaacgactgtcctaaatgtggaaatcaagtg
catgagacaaatcctttagagatgttaaggttagataacacattagaagaaattatattc
aagttggttccaggactgcgagaaggggaacagaatcgagaactggaattttggaagagg
aaacaacctcaggaaaatggagatgatggagttgtgaatgtgaaaaggcatagagacgat
gaagaggaaaatgatgaagacagggactatcacagaagtgatccacaaattgccatttgt
cttgactgcttacgtaataatggccaatccggagacaacatagtgaagggtctgatgaaa
aaattcatccgttgttcaactcgtgtaactgttgggacgattaagaagtttttgagttta
aaattaaaacttccaagcacatatgagctggatgtactatgcaatggtgaaattatgggg
aaggaccatacgatggagttcatatacatgacaagatggcgactgaggggtgaaaatttt
cagtatgagaaaagctcgacttcactgcacatgtctctcaccgaaactgcacgcggagtt
tcagaggcatccacaatctcttaccccatggtattacaataccgaccaagaattgacttt
ggttaa
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