Xenopus laevis (African clawed frog): 108699194
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Entry
108699194 CDS
T01010
Symbol
srsf5.L
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108699194 (srsf5.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108699194 (srsf5.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108699194 (srsf5.L)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
SR proteins
108699194 (srsf5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
108699194
NCBI-ProteinID:
XP_018086598
Xenbase:
XB-GENE-17340849
UniProt:
A0A974C962
A0A1L8FAL3
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All DBs
Position
8L:complement(99708162..99713300)
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AA seq
279 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARLRSRGGGPRGMGRGRYNDRFSSRRPRGDRSAPPIRTENRLIVENLSS
RVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLI
EGNKRHSRSRSRSRSRSRSSSRSRSRSRSRSRKSYSRSRSRSRTPRSNRSKSRSVSRSPV
PEKSQKSRSPSKSPASVDRQKSRSRSRSRSRSRSADSRN
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgcagggtatttattggcaggcttaacccagctgccagggagaaagacgtg
gagcgcttcttcaagggttatgggcgtatcagagatattgacttgaaaagaggctttgga
tttgtggagtttgatgatcccagagatgcggaagatgcagtctatgagcttgatggcaaa
gagctgtgtaatgagagagttacaattgaacatgctcgtctccggtctcgaggtggtggt
ccaaggggaatgggcagaggaagatacaatgaccgtttcagtagtcggcgaccccgtggt
gatagaagtgctccacccataaggactgagaatcgtcttatagtagaaaatctgtcttca
agagtcagctggcaggatttgaaagatttcatgagacaagctggagaagttacgtttgca
gatgcacaccgaccaaagcttaatgaaggggttgttgaatttgcatcctacagtgattta
aaaaatgccattgaaaaactttctgggaaggagattaatggcagaaagataaaactaatt
gaaggaaataaaagacacagtcggtcaaggagcagatcacgttcccgcagcagaagttca
tccaggtcccgaagccgctcccgctccagaagccgaaagtcttacagccgatctcgtagc
cgcagccgcactccccgcagcaaccgtagcaaatccaggtctgtgagtaggtcgcctgtt
cctgaaaagagccagaaatcaagaagcccatccaaatcgcctgcatctgtcgacagacag
aaatcacggtcaagatctcgatctcgatccagatctcgatctgctgatagcagaaactga
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