Xenopus laevis (African clawed frog): 108702847
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Entry
108702847 CDS
T01010
Symbol
trim16.S
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108702847 (trim16.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108702847 (trim16.S)
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
Motif
Other DBs
NCBI-GeneID:
108702847
NCBI-ProteinID:
XP_018094058
Xenbase:
XB-GENE-17340937
UniProt:
A0A1L8EN59
A0A974BTN6
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Position
9_10S:43922795..43931967
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AA seq
563 aa
AA seq
DB search
MADTGAPLSSKTVSKSQSASAILSMAQREEEKPGTITKSNSAAQLGTNLSASGSSGDVDR
AKPLTVDDTPDTVLCDFCLEEKVKALKTCLTCMISYCETHLRPHLEKPKLHAHQLVSPIN
DAELRRCSTHNKPLDWFCQEDLMCLCQACAMEQHKEHNPIPCCEARKQKEAEVYETVAEY
EWKLKSAEIAIEKLEANTTSIQNSILEAKKVINLQFADVHSAVNKSHTKVLEFLETRERM
ALNQSNGIKTHLEQKCSELIKYKVKVERIASHKNEFSFLQEYCEFKKSSGDDTLPSVYIG
LKDKLSVIQKVISESTEKIIEMLQTSYMDRLQEFAKEEDLGIKTMVSAIVAKEHRITAPE
PESRNEFLKYKSNLTLDPVTVHRFLRLLEDNRKVSNTAPWQHPYPDDPQRFEDFRQVLSA
ESFYMGRHYYEIQFKGEEIYMGLTYKCIDRKGSESNSCITGNDFSWTLKWNGKEFSAWHS
DVETPLKTEKFSRVGIYINYVSGNISFYGVTDKMTLLHYFDGKFTEPLYAAFWLPKKESS
LVVLSPDNIMLPPVSSPTTAGTP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacgggtgcccccctcagctccaagactgtgtctaaaagccaaagtgcgagt
gccatcctgtccatggctcagagggaagaagagaagccgggcacgatcactaagagtaat
tctgctgcccagcttggtacaaatctttctgcaagtggatcttccggggatgtggataga
gctaagcctctcacagtggatgatacacccgacacagttctgtgcgacttttgcttagag
gagaaggtaaaagccctgaagacgtgtctgacctgcatgatcagttactgtgaaactcat
ctcagaccccatctggagaagcccaagctgcatgcccaccagctggtaagtcccataaac
gacgcagagctacggaggtgcagcacccataacaaaccacttgactggttctgccaagag
gacctgatgtgcctatgccaagcctgtgccatggaacagcacaaggagcacaacccaatc
ccttgctgtgaggcgaggaagcagaaagaggctgaagtctatgagacagtggcagaatat
gaatggaaattgaagtctgccgagatcgctattgagaaactggaagcaaacaccacatct
atccagaattccattttggaagccaaaaaggttataaaccttcagtttgcagatgttcac
agcgccgtcaataaatcccacaccaaggtgctggagttcttggagacgagagagaggatg
gcactgaaccagtccaacgggatcaagacccacctggagcagaagtgcagcgaactgatt
aagtacaaagtgaaggtggagaggattgcgagtcacaagaatgaattctcattccttcag
gagtactgtgaatttaagaagtcctcaggggacgacacacttcccagtgtttatattggg
ctgaaggacaagctgtccgtgatacaaaaggtgatttccgaatcgacagagaagataatt
gaaatgctgcagacctcgtacatggaccggctgcaagaatttgctaaggaagaggatctt
gggataaaaacaatggtttctgccatagtcgcaaaggagcatcgtatcactgctccagag
cctgagtcacggaatgagttcctcaaatataagtccaatcttaccctggatccagtgaca
gttcatcgattcctgaggctgttagaagacaaccgcaaagtgtccaacaccgccccttgg
caacatccgtaccctgatgacccccagcggtttgaggacttccggcaggtgctgagtgcc
gagagcttctacatggggcgccattattatgagatccagtttaaaggggaagaaatttac
atgggtctgacgtacaaatgcatcgatagaaagggttcagagagtaacagctgcatcact
ggcaatgacttctcctggaccttaaagtggaatgggaaagagttttctgcctggcacagc
gatgtggaaacccccctgaaaactgaaaaattctccagggtgggcatctatattaactat
gtgagtggcaatatatcattttatggggtcacagacaaaatgaccctcttgcactatttt
gatggcaaatttacagaaccgctctatgcagccttctggctaccaaagaaggaaagttct
ttagtggttttaagcccagataacatcatgttgcctcctgtctcctcccctacaacagct
ggcacaccctaa
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