Xenopus laevis (African clawed frog): 108703262
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Entry
108703262 CDS
T01010
Symbol
srcap.S
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108703262 (srcap.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108703262 (srcap.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
108703262 (srcap.S)
SWR1 complex
108703262 (srcap.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
Motif
Other DBs
NCBI-GeneID:
108703262
NCBI-ProteinID:
XP_018094849
Xenbase:
XB-GENE-17330787
UniProt:
A0A8J0U4M3
LinkDB
All DBs
Position
9_10S:108111995..108174034
Genome browser
AA seq
3110 aa
AA seq
DB search
MHPCSARQQLQASDKMTGSNPVSPGSSAELSPFDLSGEMGDNARGSPTYDGMDGSLQDNS
GGQKWDSQPEIAEQAKHEAEIENRVVELRKEGFWTLRRLSKVPEPTRPKVLWDYLCEEMQ
WLSADFAQERRWKRGVARKLVRMVVRHHEELKQKEERARREEQAKLRRIATTIAKEVRQF
WSNVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLLSQSLNETLLPVSKSSSSC
IGSSQGGSLRTSPTPSVYHNNDGDFLPHDEEDDEETIEIEERQDGNDAESQRLEIELLKK
ESELPLEELLQSLGPNFLQDVDPDQDLQESDSPRTPQVFEEEDDEFTANEEEGEDEEETI
EAEEALDGQQDHTEELSELAKEGDMSLEELLQKYSMVQTDEGNVDPSEESQQSDQSDDSS
LCENSDSDSEGVEFLVKPEDSSNTDSLPPEIPEPKKEITDIAATAESFQPKGYTLATTQV
KTPVPFLLRGELREYQHIGLEWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACDKGN
WGPHLIIVPTSVILNWEMEFKRWCPSFKILTYYGSQKERKLKRQGWTKFNAFHVCITSYQ
LVLQDHQAFRRKNWIYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELW
SLMHFLMPHVFQSHREFKEWFSNPMTGMIEGSQEYNEGLVRRLHKVLRPFLLRRIKLDVE
KQMPKKYEHVIYCRLSKRQRFLYDDFMSQAATKETLTSGHFMSVINILMQLRKVCNHPNL
FDPRPIHSPFITSTICYTTPSLVLQALHRHPLQHVDMSKFDLINMEGRVCRYGSEVALPQ
YKPSRALIQEIADSPEPPPRLRPLRMKVNRMIQPVPKTDPKSIVVVNSSRATQKPLDLPP
CIANPPLPFAPHAIPTPSSSSLTGVIELVSPAKATPLVQVSAGPMAAIAPGTIRPPSVLS
SQPGIGAQQRLILTPDMQARLPSGEVINLSQLGSVSACPPAVTKPVTLQLQGAKLTLSGA
QVRQLGMAQTPRPLQGNVLHLVSSGGQHHLLSQPAQLALLQALAQQTPAPSASPQFVQGA
GTAQLGLQTVSLQSLPHSLITGANLPVPPPPGTPSGQGVVKIVVRQATRDVPAAAPRPAQ
PVRLPQTPSHPFLRVLPGGVPEPAGARVVAGEKLAPMVASSALTLATSPLLMVSSPAVAS
RLQSPVPNPLPSIHNHSMTPNTECSMTPAAPQGVALRLLTTGTSAALQLTNHRSSPPRHR
PALPNCPLQNTLLSPSSPCPSVIPDSNLCPVLQKIPNANTTSALGIVSNDVHASQFVANG
NSVVLPQTPVTKDPADSTQTLPPLLPTLCMPGTSSDPGFCVNPLLNMSHNPPSPPVLSSL
NHNINTPKLVPPTYNFSLVPALLTNSVSSTASSFNPVPARFISSPVSLLALSALPSANSS
ATPILYPHPTASPVLSRSSSSQVQANPPVSASNTLPTPLSSVTVNTTTASAPLPMLSASL
SIPISTLSSSVPVSLSPLVASASGNLSLIAATSGSSPLFSLTSSAPLSLPLAFANAPLPP
LEASTQLPGQAPITTPPIVAQTPLAALAAASQASAVLAPPRTASSVPLAPPVTTKTPVPL
AALSQAPLAALTPVQTSTAQSPGPLAHPSPEHSSMAVMSQVPVSLAQAAMCSHPLVTPAS
INDTPTAQVTTTAPSQASVTLTPVASAQAPVPVGAAQAPVPVGAAQAPVPVAAAQAPVPV
AAAQAPVPVAAAQAPVPVAAAQAPVPFPLLSPAAAQVSLAAPSVLASPAKYDKIKTSVSA
PVSPLVASASLLMEASDSPSTASVSSPIPSYATSIPAPGASVQLPLQFSSLPAHVSSAPA
HMPLLAASASTPIPPLASRVSAPLTPLAAYASVPLPTLAANITASPLPSSSSTIFTTQSF
SAPTAHLPSNFVSASSAVFTAITTASLSLGTSATSATSCVSDPVPSLVSPFSVPLTPSAP
SPVSAPDPPLSLSIDGPSSFSVTLGTAPDPDLMLDGDAPHPTNALLLHASRLRRQLPPPP
RSPFYLEPLEDRRRKQKMEKLDRLFHLNERRCKLPPIYGTEVLHFCTLRNTDWRFGFPND
FPGPQNLHNYWLRTDALSKFILTPEQRLGQLGHIIERFIVAMPPVEAPPISLHTSHPPPS
MLLQESVFRESLRRELTPHSRCLHRIVSNMRTQFPDLRLIQYDCGKLQTLDRLLRQLKTE
GHRVLLFTQMTRMLDVLEQFLNYHGHIYLRLDGSTRVEQRQVLMERFNMDRRIFCFILST
RSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTVEENILK
KAQQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMEEPPPKVVESGVASPEDGTLEDESTT
QNANILEQALCRAEDEEDTLAASLVRAEQVADLAEFNENAPLEPEEEEQSRAEQEINALV
DQLTPIERYAMIFLEASLEDISREELKQAQEQVEAARKDLFLAKEDTGPSLDDTWEEENR
KTRRVRAQSSSKPPGERVGVRVSERLRGARTADGSDITDSPALLETSSPDQQTLEDNASV
ISQTENTVSELNISHKEASSSPSHQPCPSTPLAPTTSPPKETPPQLSSSVKEENTDESAV
SDSEILLVPKSDPTASSGVPQDLESSTPRTPRRKVTADCEIRMAGAGDTSPTEKVLRRLP
GRLVTVVQERPPVLRRQNRGKASCPSADPQSPSPSHQSDDTSEAGSPPPKRKRGRPPKSK
LEMSPTEAVSIGSSAVEESSDIDASLLEKPCDKGLSPPGPNSELPVSTKATHVPGSPASC
AKSNSDIENGSSPVEKRKRGRPPKRRDSVTTSPVSPLSSGETTLELLPPSVQLYTNVTKS
PPIIPMVSSNIPQAGGCVEGTSSSGGDGPLTPPKRKRGRPPKSQVMSSPNLHNDKRDSSP
ERSPSPHHTKSPPGRKKKQPSSSSKKDEELTASADTDNSSEEETVRTPLTRSARTRLQPN
QVPLVSTPNPNSAGKSLRGRSACSPHLRGRPGKRSKPPNISSPSPPSSSPHGSSSERQSN
GGRKRHCPPAEQRILRSSLTAPPSSNTRSARPPPPLPNSPSSHRVRKAKT
NT seq
9333 nt
NT seq
+upstream
nt +downstream
nt
atgcacccctgttctgcccgacaacagctgcaggcatcagacaaaatgacgggcagtaac
cctgtgtctcccggctccagtgcagagctgtccccctttgacctctctggtgaaatgggg
gacaatgctcgtggctcccccacttacgatgggatggatggttccctacaagataacagt
ggggggcagaaatgggacagtcaaccggagattgccgaacaagccaaacatgaagccgaa
attgagaaccgggttgtggagctgcgcaaggaggggttttggactctacgtcgactctcc
aaggtccctgagccaacacgtcccaaagtgctctgggattacctgtgcgaagagatgcag
tggctttccgcagattttgcacaagaacgccgctggaaacggggagttgccagaaagctg
gtacggatggttgttcgtcaccacgaggagctgaagcaaaaagaggaaagggcacggcgg
gaagagcaggccaagctcaggcgtattgccacgacaattgcaaaggaagtccgccagttc
tggagtaacgttgagaaggttgttcaatttaagcaacaatctcgactagaggagaagcgg
aaaaaagcacttgacttgcagctggatttcatcgtgggtcagacagaaaaatattccgac
ctcctcagccagagtttaaatgagacgttgctccctgttagcaagtccagctcctcctgc
attggatcttcccagggcggttctttaaggaccagccccactccatctgtctaccataat
aatgatggggatttcttgcctcatgatgaggaagatgatgaagagaccatagagatagag
gagcgtcaagatgggaatgatgcggagagccagaggctggagatagagcttctgaaaaag
gagagtgaacttcctttggaggaactgctccagagtttgggacccaattttctccaagat
gtggatccagatcaggacttgcaggagtccgattcccctcgaacgccccaagtctttgag
gaggaagatgacgagttcactgctaacgaggaagaaggtgaagatgaggaggagactatt
gaggcagaagaagctctagacggccagcaagatcataccgaggaactgtctgagcttgcc
aaagaaggagatatgtctttagaggaactactgcagaagtactcaatggtgcagacagat
gaggggaatgttgatccaagtgaagaaagccagcaatctgaccaatcagatgactcttct
ctatgtgagaattctgactctgattctgaaggggttgaatttcttgtgaagccagaggac
agttccaatacggattcgttgcctccggagatacccgaacctaaaaaagaaatcactgat
attgcagcgaccgcagagtcttttcaacccaaagggtacactctggcaactacccaggtg
aagacaccagtcccattcctccttcgaggggagctaagagagtatcagcacattgggctg
gagtggctagttaccatgtatgaaaaaaagctaaatggaatcctggcagatgaaatgggt
ctgggaaaaaccattcagactatatccttgctagctcacctggcatgcgacaaaggtaac
tggggacctcatctgatcattgtaccgacaagtgttatccttaactgggaaatggaattc
aaacggtggtgtcccagttttaagatcctcacctattatggatcccaaaaagaacgcaag
cttaagagacagggctggaccaaattcaacgctttccacgtgtgcatcacgtcttatcag
ttggtgctgcaagatcaccaggccttccgcagaaaaaactggatatacctcatcctggat
gaggctcagaacatcaagaatttcaagtcccaacgttggcaaagcctgctaaattttaac
agtcagaggcgacttctactcactgggactccactgcagaattctctcatggagctttgg
tcactcatgcacttcctgatgcctcacgtcttccagtctcaccgtgagtttaaggaatgg
ttctccaaccccatgactggcatgattgagggcagccaggagtacaacgagggcctggtg
cgcaggctgcacaaggtattgcgtccattccttttgcgcaggattaaactggatgtggaa
aaacagatgcctaaaaagtatgagcatgtaatctactgccgtttatccaagcgccaacga
tttctgtatgatgacttcatgtcacaagcagccacaaaagagactctgaccagtggacat
ttcatgagcgtgatcaacattctaatgcagctgcgcaaagtctgcaatcatcccaactta
tttgatccgcgcccaatccactctccttttatcacaagcaccatttgctacactacacct
tccctggttctgcaagctcttcatcgtcacccgctccagcacgtggacatgtccaagttc
gacctgattaatatggagggacgagtgtgccgctatgggagtgaagttgctctaccgcag
tataaaccctcacgtgcgctaatccaagagatcgcagattccccagaaccccctccacga
ctccgtccccttcgtatgaaggttaacaggatgattcagcctgttcctaaaacagacccc
aagagtattgttgttgtgaatagttctcgagcaacacagaaacctttggatctgccaccc
tgcattgccaacccacctttgccttttgctccgcacgcaatacctactcccagctcatct
tcattgacaggagttatagaactagtgtcacctgcaaaggcgaccccattggttcaggtt
tctgcagggccaatggctgccattgctcctggtacaataaggcctccgtctgttctgagc
tcccagcctggaattggtgcccagcaaaggttaatcctaacacctgacatgcaggccagg
ctaccttcaggagaagtgattaatctgtctcagcttgggtcagtgagtgcatgtcctcca
gccgtcactaaacctgtaactctgcagctgcaaggtgccaagctcactctgagtggtgcc
caagttcgacagctgggaatggctcagaccccacgcccactgcaaggaaatgtccttcac
ttggtgtcttctggtgggcagcaccacctgctaagccagcccgcccagcttgctcttctc
caggctttggctcagcaaacccctgctccctctgcttctccacagtttgtgcagggagca
ggtaccgctcagcttgggcttcagacggtctccctgcaatctcttcctcattctctaatc
acaggtgccaaccttcctgtaccccctccgcctggcactccatctgggcagggtgtggtg
aaaattgtggttaggcaagcgacccgtgatgttcctgcagctgcacctcgtccagctcaa
cctgtgcgtttgccacaaaccccttctcatcctttcctgagggttttacctgggggagtc
cctgagcctgcaggtgcacgagtagttgctggtgaaaaactagcacctatggttgcatcg
tctgctctcacactggctaccagccccctgcttatggtctccagtcctgctgtggcttca
agacttcaatctccagttccaaaccccctaccctctatccataaccattctatgaccccc
aatacagagtgttccatgaccccagctgctcctcaaggtgtggccctgcgcctactcacc
acagggacctctgctgcacttcagctcacaaaccatcgatcttccccaccaagacaccgc
cctgcactgccgaactgtccactacaaaacactctcctctcacccagttctccatgtcca
tcagtaattcctgactctaacctgtgtccagtcttacagaaaattccaaacgccaataca
acctctgccttaggaatagtgtctaatgatgttcatgcttcacaatttgttgctaatgga
aactctgttgtccttcctcaaactccagtaacaaaagatcctgcggattctactcagaca
ctacctcccctgctgccgactctctgcatgcctggtacaagctcagatcctggattttgt
gtcaacccactgcttaacatgtctcacaaccctccttccccacctgtgctatccagtctt
aatcataatattaatactcctaaactggtacctccaacatacaatttcagcttggttcct
gcactacttaccaactctgtctcttccactgcctccagctttaaccctgtgcctgcacgt
tttataagtagcccagtctctctcctggcattgtcagcactgccctctgcaaatagcagt
gcaactcctatcctgtaccctcatcccactgctagtcctgtactctctcgttcttcctct
tcacaggtacaagccaatcctcctgtttcagcatcaaacactcttcctactcctctttcc
tctgtaactgtcaacaccactactgcttctgctccgttacccatgctcagtgcatctctc
tccatccccatctccacattatcctccagtgttcctgtgtctctctctccattggtggca
tctgcctctggcaatctttcattgattgctgcaacttctgggtcttctcctttattttct
ctgacttcttctgctccattgtcattgccactagcttttgcaaatgcccccttgcctcca
cttgaggcatctactcaactgcctggccaggcccccataaccaccccgcctattgttgcc
caaacccctttggcagccctggcagctgctagccaggcctctgctgttttggccccaccg
aggactgcttcctcagtccccttggccccaccagtcactaccaagacccctgtgcctttg
gcggctctttcccaggcccctctagctgccttgactcctgtccagacatccacagctcag
tcaccaggtcctttggctcatccatctccagagcactcctctatggctgtcatgtcccag
gtcccagtttctttggcccaggctgccatgtgttcacatcctttggtcaccccagcttct
ataaatgacactccaactgcccaggtaaccactactgctcctagccaggcttctgttact
ttgactcctgtagcatctgcccaggccccggttccagttggtgccgcccaggccccggtt
ccagttggtgccgcccaggccccggttccagttgctgccgcccaggccccggttccagtt
gctgccgctcaggccccggttccagttgctgccgcccaggccccggttccagttgctgcc
gcccaggccccggttccatttccattgctttctccagctgctgcccaagtctctctggct
gctccatctgttttggcttccccagccaaatatgataaaataaaaacatctgtatcagcc
cctgtgtctccattggtagcctccgcttccctgctaatggaagcctctgattccccgtca
acagcctcagtaagttcccctataccctcatatgcaacttctattcctgcccctggagca
tctgtccagttacctttgcagttctcatctttaccagctcacgtgtcttcagcacctgcc
cacatgcctttactggctgcctctgcatcaacacctattccaccactagcctcgcgtgtc
tctgctcctctgacccctctagcagcttatgccagcgttcctctgcccaccttagcggct
aatataactgcttctcccctgccatcttcatcctccactatattcaccacgcagtccttt
tctgcccctactgcacatttgccttctaactttgtttctgcctcttcggctgttttcact
gctatcaccacagcatctttgtctttaggcacctctgctacctctgctacctcctgtgtt
tcagatccagtgccatcactagtttcccccttttctgttcctttaactcccagtgctccc
tcacctgtatctgccccagatcctcctttatccctgtccattgacggcccttcatcattt
agtgtaactcttggcactgctccagatcctgatttaatgctggatggagatgctccccat
ccaaccaatgccctacttctacatgcctcaagactacgccggcagctgccaccaccacct
cggtcacctttctatttggagccactggaagatcggcggcgcaagcaaaaaatggaaaaa
ctggatagactcttccatttgaatgaaaggcgctgtaaactgcctcccatttatggcact
gaagtccttcacttctgcactctacgcaatactgactggcggtttggcttccctaatgac
ttccccggtccccagaatctacacaattactggctacgaacggatgcattgagcaagttc
attttaaccccagagcagcgactggggcagcttggccacatcattgaaaggttcattgtc
gctatgcctcctgtggaggccccaccgatctccctgcacacttcacacccgccaccatca
atgctgcttcaggagtcggttttcagggagtcgctgcgcagagagttgactcctcattcc
cgctgtttacaccgcattgtgtctaacatgaggactcagttcccagatctacggctcatt
cagtatgactgtgggaagctccaaacacttgatcgcttactgcgtcagttaaagaccgag
ggacaccgggtcctgttgtttacgcagatgacccgcatgttggacgttttagagcagttc
ctgaattaccacggacacatttatctgcgacttgatgggtcaacacgcgttgaacaaaga
caggtattgatggagcgttttaatatggatcgtcgcatcttctgcttcatcctatcaact
cgcagtggaggagttggagtcaatctgactggtgctgatacggtcatcttctatgacagc
gactggaatcccactatggacgcccaggcccaggaccggtgtcaccgtattggtcagact
cgtgatgtgcatatatacagattggtcagtgagcgcactgtggaggagaacatcctaaag
aaagctcagcagaagcgaatgttgggggatatggctatcgaaggaggaaactttaccaca
gcctactttaaacagcaaaccatcagggagctgtttgacatggaagagcccccacctaag
gtagtggagtccggagttgcatctccagaggatggcacattggaagatgaaagcacaaca
caaaatgcaaacattcttgaacaggccctctgcagagccgaggatgaggaggacacctta
gctgcctctctggtccgtgctgagcaagttgcagaccttgcagagtttaatgagaatgct
cctttggaacctgaggaggaggaacaaagcagggccgagcaagaaataaatgccttggtt
gatcagctgactcctattgaacgatatgccatgatctttctggaagcttcactggaagac
ataagtcgggaggagctcaaacaagctcaggagcaagtagaagctgcacgaaaggacctt
ttcctggctaaagaagacaccggcccttctctggacgacacatgggaggaagagaataga
aagacacgcagggtacgagcccagtcttccagcaaaccaccaggggagagagtaggagtc
cgtgtgagtgagcgattgcgtggagccaggacagcagatggttcagacatcacagacagt
ccagccttgcttgaaacctcgtctcctgaccaacaaaccttggaagacaatgcatccgta
atctcacagaccgagaacacagtctcagagttgaacatatctcataaggaggcctccagc
agtccatcccaccagccgtgtccttcaaccccattagcacccaccacttctcccccaaaa
gaaacccctccgcagttgtcctcttctgtgaaggaagaaaatacagacgagtctgctgta
tcggacagtgaaatactgcttgtgccaaaatctgaccccaccgcttccagtggagtgccc
caggacctggagagcagcactcctcgtacaccacgcaggaaagttactgccgactgtgaa
attcgaatggccggtgcaggggacacgtccccaactgaaaaagtcctgaggcggttgcct
ggccggctagtgactgtagtgcaggagcggccgcctgttttacgccgacagaatcgcgga
aaagcaagttgcccttcagctgatcctcaaagcccctctccttcccaccaatcagatgat
acatctgaggctggcagtcccccaccaaagagaaaaaggggaagaccaccaaagtcaaaa
ttagaaatgtctccaacagaggccgtgtctataggaagttctgcagtagaagagtcttct
gatatagacgcttctctgttggaaaaaccttgcgacaaaggcctttcaccccctggacct
aattcggaactgcccgtatccactaaggcaacccatgtaccaggaagtcctgcgtcgtgt
gcaaaatccaactctgacattgaaaatggttcttcacctgttgaaaagaggaaaagggga
aggccccccaaaaggagagacagtgtaacaacctctccagtttcccctttatcttctggc
gagactacactggagctgctcccaccttctgtccaactctataccaatgtaacaaaatct
cctcccatcattcccatggtttcttccaacattcctcaggcgggtgggtgtgtggagggg
accagcagcagtggaggtgatggacctttaacccctcctaaacggaaacgtggccgcccc
cctaagtcacaggtgatgtcaagtccaaacttgcacaatgacaaaagagacagctctcct
gaacggtcacccagcccccaccacacaaagtctcctccggggaggaagaagaaacaaccc
tcctcttcttccaagaaggatgaggagctcacagcttccgctgatactgacaactcctct
gaggaagagactgtaaggactcctctcacccgcagcgcaaggacacgtttgcagcccaac
caggtgccacttgtatccactccaaacccaaattctgctggtaaatccctcagaggacgt
tcagcctgttctccccacctccgagggagacctggcaaaaggagtaaacctcccaatata
agctccccgagtcccccatcctcttccccccacggcagttctagtgaaagacagtctaat
ggtgggagaaagcgccactgcccacccgcagaacaacgcattctgcgcagctcactcaca
gcccctccctccagtaacactcgctccgcccgtccccctcccccactacccaactctccc
agcagccacagagtcagaaaagccaagacgtga
DBGET
integrated database retrieval system
