Xenopus laevis (African clawed frog): 108713977
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Entry
108713977 CDS
T01010
Symbol
frem1.L
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108713977 (frem1.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
108713977
NCBI-ProteinID:
XP_018113257
Xenbase:
XB-GENE-22169439
UniProt:
A0A974I4F6
A0A1L8HY31
LinkDB
All DBs
Position
1L:134243564..134319995
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AA seq
2174 aa
AA seq
DB search
MKPSLLYPALLSLLLTRGLCTSFIKVNHGMKVMKGQRAFLSESDLQFSIPREKDACKVEV
VVNEPITQRVGKLMPQVFDCHFLANEVEYTHNGCPLLDEDEVMLRLYRFTETETFTETFL
LRVKLIEPDCNIIQLGPKRLEVPEFYGLSDFIDKNILSFDYDKRINLECTIRISPSESFL
PAHGQLVTGDPVKQEPRGDQPQSFFHGSDQKPGPLCKNGGCIQGLKSIQKTIKISCEDFL
VMGIRYQHLDPPSPDVDYIVIRLDLTDTRSKSLYKSEHAWIPVLIRDAVPNQIPKATFMS
MFILEVDQFILTPISTATLDAEDSETAKHLLVFNITVPPSNGFITHLSDHTKPITSFTWK
DLNEMLIAYQPPNSSHTERRNLEVEFEVHDFFFERSSPITVHISIRTADTNAPRVSWNMG
LDLLEGQSRPITWKQFQIVDNDNINAVRLVIVDGLQHGRITLRGGKGFMFTVKDIQAGVV
CYHHDDSDTTKDFIVFRIFDGRHSIRHKFPINILPKDDSPPFLITNIVIELSEGQTVLIQ
GSMLCASDMDSSDDYIRFNITKPSIAGEIIKKPAQNLLAYPVTSFLQRDLYNGFIYYRHF
GGEVFDDSFELVLSDSHDPPNFSGPQAVIIHISPVDDQLPIEAPGTLRHLIVKENEVVYI
TKKQLHFIDPELPDRDLIYTLATPPCWVQPYSSLNAGKIVLVETIAKLGKDYAGDAAKTF
SQHAVNHLKVAYIPPVEEIGPIPKHVQLILSVSNQHGGTVQGICFNITILPIDNQPPEVF
SYDLKVEEGGFGQITASHIHITDKDTRQEHIKVILQKTPPHGIVQLDGSALQEGDPFTCL
DLSTLKVRYLHDGSETLQDEISFIATDGINSSEFILKIQVSPINDEPPLIKENLISTITC
KEGAEIVISADYISATDVDSDDMKLIFMIARQPRYGILLKAGTFIDRFTQRDVLEGLVHY
RHTSGEIGLKVCVDIITLVISDAEADKQQKNCCNNGSHLLLLPNHDSFPVYDLNITILPV
DNQPPSVIIGEMFVVDEGKSAALRVDHLSAMDSDTESNELEFILVSPPRYGYIENVLPSP
GFEKSNMGISIAAFLLKDIRSLNINYVQSRHQRIEPTTDQFTLYVTDGKLRSVEKPFYIV
INPTNDEVPEFLARNITVVEGQMKKLDPAVINVSDMDVPQNHLYFTVIEQPQHGLIIEES
YINEHMNRSQLIEKHQTNSLPVIQDFSMELLKNGMKVIYMHDDSENLADSFTIQLSDGKH
EVRRTIFVNVIAVNDEKPVLTKHCEVVLSMGEHTLISSAILSADDKDTPRTNICYVIDKA
PEHGQLQMKVDQNWVPLNTGMRCTQEDIDMNLVRYVHTGAMGSKNEDKFNFHLWDGDNRS
PEISVNIYVKDMEKGDIALFVKMLNVSKGERVIITTNVLLAIDGTDRPEELLYVLSSPPQ
YGQIEYVKHPGIPVTSFSQMDVAAQTICYVHDINSAAAATDVFRFLVSNGLRTKHGIMTV
ALETFDRTLPTLSRNVGLRQMKGSMECISPATLQALDPDTPSQNITFQLVDLPRYGKLYL
RGFPLQQDHITQRDIDNLDVAYKHAGQDAQIDRFMFTVTDRANQGFIINGKIQMEPVPFS
IQVDPVDSTAPRIVHLQCLTAVELLRNGQYGIYITSRHLKASDPDTDDERIIFHILSGPH
YGHLENVTTGRFIRERFTQGDLNSKSVLYLINPSVDVFHDTIEFEISDPVGNRALPQILE
LKWSQIELLQGMYEVCETEAVVSLKMTRRGYPLESAFVSLKVNEISAVVGKDISMTPSRL
VQFDPGVSTKTWNIVIIQDGLEEDDEVFEVVLSSPVNAVLGTKTKAVVKIVDPRGGGCSS
SKVSKMKTTGTGLLNCTVTPLRKPCPVFSFKETADKVREDVQEDVQALQNPRKRLRLTGN
RKTIKPSSVFRNETDIIYQYHGIVSLRVEEDLPVFNETKKTKVLVKNRGQRKIHAPSQKP
DILQLGRTMLDSHVTTSGQDNTISFPKRCTPSLKGLLHFEDTLQRLFQCDGISWNPWISA
KDTKAAKCPFGWTYHDGYCYILISDQKATWITAARACREQHYGTLVDVFSKQQMEWLWNF
SGRKSFWIGLNDRVHNGKWEWSKGEMVTFTNWKKGPPQSSHKGKNCVLAQKRGKWQAKNC
KKGKGQYYICSKKL
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttctcttctatacccagctttgctgtcactgttgctcacaaggggcctctgc
acctcctttataaaagtcaaccatgggatgaaagttatgaaaggacagagagcattcctg
tcagagagtgacctgcagttttccatccccagggagaaggatgcctgcaaagtggaagtg
gttgttaatgaacccattactcagagggttggaaagttaatgccacaggtgtttgactgc
catttcctagccaatgaagttgagtacactcacaatggctgccctctcctggatgaagat
gaagtcatgctcagactttacaggtttacagaaactgaaacttttactgaaacctttctg
ttgagggtgaagttaatagagcctgactgtaatatcatacagctggggcctaaaaggctt
gaagttccagagttttatggtctatctgactttattgataagaacatactgagctttgac
tatgacaaaagaataaaccttgaatgtaccatcagaatatcgccttctgaatctttcctt
cctgcacacggtcagcttgtgactggagatcccgtgaaacaagaaccacgtggagatcaa
cctcagagcttcttccatggatcagatcaaaagccaggtcctctgtgcaagaatggaggt
tgtatacaaggtttaaagagcatccagaagactattaaaataagttgtgaagatttcctt
gtgatgggcattagataccagcacttggatcctccatctccggatgttgattatatagtc
atcaggttggatcttacagacacaagaagcaaatcactttacaagtcggagcatgcctgg
attcctgttcttattcgggatgctgttccaaatcagatccccaaagccaccttcatgtcc
atgtttatcttagaagtagatcagtttattctaacacccatctcaacagcaacactggat
gctgaggacagtgaaacagccaaacatcttctggtcttcaatatcacagtacctccaagc
aatgggttcatcacacacttatctgaccacaccaagcctattacatccttcacatggaaa
gatctcaatgagatgctcatagcatatcagcccccaaacagcagccacacagagagaaga
aacttggaggtggagtttgaggtgcacgacttcttttttgaaaggagttctccaattaca
gtgcatatctctatacgtacagctgacacaaatgctcctcgtgtttcatggaatatgggt
ttggatctactggaaggccagtctcgaccaatcacatggaaacagtttcaaattgtagac
aatgacaacatcaatgcagttcgtttggtcattgtagatggattgcagcatggacgtatt
actctaagaggtgggaaaggatttatgttcactgttaaggacatccaggcaggagttgtc
tgctaccatcatgatgacagtgacactactaaggattttatagtcttcagaatatttgat
ggccgtcacagcatacgacacaagtttcctattaacatcctaccaaaagatgatagccct
cctttcctcattacaaacattgttattgagctttctgaaggtcaaacggtccttatccag
ggatctatgctctgtgcttctgatatggactccagtgatgactacatacgtttcaatatc
acaaagccttctatagctggagagattataaagaaaccagcacaaaatcttcttgcttat
cctgtcacgagcttcctgcaacgagacttgtataatggttttatttattatcgccatttt
ggaggagaagtatttgatgattcatttgagttggttctgtctgatagccacgatccacca
aacttttctggccctcaggcagtaatcatacacataagcccagtggatgaccaactaccc
atagaggcacctggaacattacgccatttaatcgtaaaggagaatgaggttgtttacata
acaaagaaacagctgcatttcatagacccagagttgcctgatagagatcttatttacaca
ctggccactccaccttgttgggtgcaaccctacagcagtttaaatgcggggaagatagtt
cttgtagagactatcgctaaacttggaaaagattatgcaggggacgcagcaaaaacattt
tcacagcatgctgtgaatcatctcaaagtcgcttacattccaccagttgaagagattggc
ccaattcctaaacatgtccagttaatattatcagtgagtaaccaacatggaggaacagtt
caaggcatctgttttaatatcactatccttccaatagacaatcagcctcctgaggtgttt
tcatatgacttaaaagttgaagaaggtggtttcggtcaaattactgcaagtcacattcac
atcacagataaggacaccagacaagaacatattaaagtcattttgcagaaaactccaccg
cacggtattgttcaacttgatggatctgcattgcaggaaggtgacccattcacctgcttg
gacctcagcacattaaaagttaggtacctgcatgatggctcagagaccctacaagatgaa
atctcatttattgcaacagatggaatcaattcatctgagttcattttaaaaatacaggtt
tctcctattaatgatgaacctccacttatcaaagagaacctcatttccaccattacttgc
aaagagggggcagagatagtcatatcggcagactatatctcagctactgatgtagatagt
gacgacatgaagctgatatttatgatcgctcgccaaccacgttatggtattttgctgaag
gctggaaccttcatcgatcgattcacccagagagatgttcttgaaggattggtacattat
cgacatacaagtggggaaattggcttgaaggtctgtgttgatataataacactggtaatt
tctgatgctgaagcagataaacaacaaaaaaactgctgcaacaatgggtctcatctgctg
ttattgccaaaccatgattcttttcctgtatatgatctcaatatcacaattcttcctgtg
gacaaccaacccccatcagttatcatcggtgaaatgtttgtagtggatgagggcaaatca
gctgccctcagagtagatcatttaagtgccatggactctgatacagaaagcaatgaactg
gaattcatcttggtttctcctcctcgatatggttacattgaaaatgtccttccgtctcct
ggatttgagaaaagtaacatgggcataagtattgctgcatttctactcaaggatattaga
tctctaaacatcaactatgtccagtctcgccatcagaggattgaaccgaccactgatcag
tttacactgtatgttactgatggcaaactgcgttctgttgaaaagccattttacatcgta
atcaatccgacaaatgatgaggttccggaattcttagccagaaacataacagttgttgaa
ggccaaatgaaaaaattggatcccgcggtaataaatgtgtcggacatggatgtgccacag
aatcacttatactttactgttatagagcagccccaacatggactgattattgaggaatcc
tatattaatgaacatatgaatagaagccaattgatagaaaaacatcagacaaacagcctg
cctgtgatacaagatttttccatggagctgctaaaaaatggaatgaaggtgatatacatg
cacgatgactcagaaaaccttgctgacagtttcactatccagctgtctgatggaaaacat
gaagtcaggagaaccatttttgtgaatgtaattgctgtaaatgacgaaaagcctgtgcta
accaaacactgtgaggtggtgctgagcatgggagagcacactttgatttcaagtgccata
ctgtcagcagacgataaggacacacctagaacaaacatttgctatgttattgacaaggct
ccagaacatggccaacttcagatgaaagtcgatcaaaactgggtgcccttgaatactggg
atgagatgcacccaggaggacattgatatgaacctggttagatatgtgcatactggagca
atgggctcaaagaatgaagacaagtttaatttccacctttgggatggtgataaccgatca
cctgagatatctgtgaatatctatgtcaaggatatggaaaagggagatattgcacttttt
gtgaaaatgcttaatgtgtctaaaggagagagagtcatcataacgacaaatgtcctactt
gctattgatgggacggacagaccagaagaactgctctatgtgttatcctcaccaccccaa
tatgggcagattgaatatgtcaagcatcctggaatccctgtaacaagtttcagtcagatg
gatgtggctgctcagactatctgctacgtccatgatatcaattctgcagctgctgctact
gatgtgtttagatttcttgtcagcaatgggctgagaacaaagcatgggatcatgaccgtc
gcactggaaacattcgatcgaactcttccaacactgtccaggaacgttggtctaagacaa
atgaaagggtctatggagtgtatttccccggccactctacaggcactggaccccgatacg
ccatctcagaacattacttttcagttggtggatctccctcgatatggaaaactatacctc
agaggctttccactgcagcaagatcacatcacccaaagagatattgacaacctagacgtt
gcctataagcatgccgggcaggatgctcaaatagacaggttcatgtttactgttacagac
agagcaaatcaaggatttatcattaacgggaaaattcagatggaaccagttccattctcc
atacaggtagatcctgtggacagcactgcccccagaattgtccatctacagtgccttaca
gcagttgagcttctaagaaatggccagtatggaatttatattacttcaagacacttgaag
gcatctgatccagacacggatgatgaaagaattatctttcacattttaagtgggccccac
tatggtcatttagagaatgttacaacaggcaggtttataagagaaagattcacacaaggg
gatttaaacagcaaatcagtgctctacctaataaatccatccgtggatgtttttcatgac
accatagaatttgaaatttcagatcctgttggaaacagagctttaccgcaaatcttagag
ctgaaatggagtcaaattgaattgctccaaggcatgtatgaggtgtgtgaaaccgaggca
gttgtgtctttgaagatgacaagaagaggttaccccctggagtctgcgtttgtttcactc
aaggtgaatgaaataagtgctgtggttgggaaagatatttccatgactccttccaggctt
gtacagtttgatccaggagtgtcaaccaagacttggaatatagtaattatccaggatgga
ttagaagaagatgacgaggtctttgaagtagttctgagttctcccgtgaatgctgttctt
ggcactaagacaaaagctgtagtgaaaattgtggaccccagaggaggtggctgtagttcc
tccaaagtcagcaagatgaaaacaactggaactggcttactaaactgtactgtaacacct
ttgcgcaaaccttgtcctgtttttagttttaaagagactgcagataaggtcagggaagat
gtacaagaagacgttcaagcattacaaaatccaaggaagagactgaggctcacagggaac
agaaaaactattaaaccatcatccgtatttaggaatgaaacagacatcatttatcaatat
catgggattgtgtctctcagagtggaagaagatctcccagtattcaatgaaacaaagaaa
accaaagtactagtaaagaaccgtggtcagaggaagatacatgctccctcccaaaagcct
gacattcttcagttaggcagaaccatgttggattctcatgtgacaactagtggacaggat
aacacaatatcgtttcctaagcgatgcacaccaagtctaaaaggactcttgcattttgag
gacacattacagagattgttccagtgtgatggcatatcatggaatccatggatctctgct
aaggatactaaagcagcaaagtgcccatttggctggacttaccatgatggctactgctat
atactgatcagtgatcaaaaggccacttggattacagcagccagagcatgcagagaacag
cattatggtactctggtagatgtattcagcaagcaacaaatggaatggctttggaatttc
agtggcagaaaatccttttggataggcctcaacgatagagttcataatggaaagtgggag
tggagcaaaggggaaatggtcaccttcaccaactggaaaaaaggccctcctcaatcttca
cacaaagggaagaattgtgttttggcacaaaagagaggcaaatggcaggccaaaaactgc
aaaaaaggcaaaggccaatactatatatgttcaaaaaagttgtaa
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integrated database retrieval system
