Xenopus laevis (African clawed frog): 108715810
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Entry
108715810 CDS
T01010
Symbol
ecm2.1.S
Name
(RefSeq) extracellular matrix protein 2
KO
K08119
extracellular matrix protein 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
108715810 (ecm2.1.S)
Proteoglycans [BR:
xla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
108715810 (ecm2.1.S)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
VWC
LRR_5
LRR_6
Motif
Other DBs
NCBI-GeneID:
108715810
NCBI-ProteinID:
XP_018116773
Xenbase:
XB-GENE-17340979
UniProt:
A0A1L8GHA5
A0A974HMN6
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Position
4S:103360127..103391921
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AA seq
712 aa
AA seq
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MRTVFLIFLLLLITEWTTCAQDEHFSTSKSKKRKIKNRRRRVLSKSSMAIQQMTKPSTTP
IPELHMPVFNADDAIVHVLQTILGVNEQAPNYNILPVKKGHCTVNGLVMFDNAVWSPNPC
ITCMCSNGNEICDETICPLLTCPITETHWGECCPACSNTVNHHQPIQQPNRILLENVAEF
SGDSPEPNNLNDLVILKAPKTQQEMDEFLKTEGGREKLEAKKLKRKKKKEDKKQKVRERE
FEENRKAYEQEEARYKEEKRNREEEKKRNEEKMREEELQKQREREEQEQYREDDEDDEEE
EYILRGDVFRISPRVPGSRRPAVIHHPPLPPGCFISETTVGCSNAKLKHVPAISDPDVKS
IELTGNAITSILKETFNGMPNLERIDLSRNSLTSNEIDSQSFKSLKNLKRLYLDGNLLVH
MPTELPSSLEELKLNDNKLEGLKKHSMEDLTNLVTLEMEGNQLSEGNVSPLVFKPMKHLA
YLRLGRNKFRTIPQGLPVSIEELYLESNEIEEIVETSFNHTKNLNTVVLRHNKLEESRID
PLTWIFHRNLESIDLSYNKLYQVPSYLPKSLMHLVLVGNQIERIPGYVFAHLNPGLEYLY
LSFNKLDNDGIDAVSFHGAYHSLREIFLDHNELRDVPTGIEHMTDLHILRLNNNKIRSVS
PYCICSAEEEGDSSLEELHLENNFINTREISPYAFFCLRSYSSVILKPQKVK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgtatttctaatctttctcctactgttaattaccgagtggaccacttgcgct
caagatgaacatttctctacttctaaatccaagaagaggaagataaagaacagacgcaga
agagttttatcaaaaagttccatggcaatacaacagatgactaagccctcaaccacgcct
attccagaattgcacatgcctgtcttcaatgcagatgatgccatagtgcatgttttacaa
actattttaggtgtgaatgagcaagctccaaattacaacatattgccagtaaaaaaaggc
cattgcacagtaaatgggttggtaatgtttgacaacgcagtgtggtcccctaatccttgc
attacgtgcatgtgttcaaatggaaacgagatttgtgatgaaaccatctgcccacttctg
acatgtcctattactgagactcactggggagaatgctgcccagcctgtagtaacaccgtt
aatcatcaccaacctattcaacagcctaatagaattttactggaaaatgtagctgaattt
tctggggattctccagagccaaacaacctcaatgatctggtaattttgaaggccccaaag
acacaacaagaaatggatgagtttcttaaaactgagggaggtagagaaaagttagaagca
aaaaaactgaagcgcaaaaagaaaaaggaggacaaaaaacagaaagtcagagagagagaa
tttgaagaaaatagaaaagcatacgaacaggaggaagctagatataaagaagaaaagaga
aatcgtgaagaggaaaagaaaagaaatgaagagaagatgagagaagaggagctgcaaaaa
cagagagagagagaagaacaagagcagtacagggaagatgatgaagatgatgaagaagag
gaatacattttaagaggagatgttttcagaatctcaccaagagttccaggttctcgcagg
cctgctgtgatacatcatcctccattgcctccaggttgttttatctcagaaactacagtt
ggctgttccaatgctaaactaaaacatgtaccagctatatctgatcctgatgtgaagagc
atcgaacttacaggtaatgctattacttcaattctaaaagaaacattcaatggcatgcca
aacctggaacggattgaccttagcaggaacagtcttacatcaaatgaaatagactcacaa
tcatttaagtcactgaaaaatctaaaacgtctgtacttggatggaaacctactggtccat
atgccaacggaattaccatctagtttggaggagttaaaactgaatgacaataaactcgaa
ggcctgaaaaaacacagtatggaagacctaacaaacctggtaacattggaaatggaagga
aaccagcttagtgaaggcaatgtcagtcccttagtattcaaaccaatgaaacatttggct
tatttgcgcctaggaaggaataaattccggacaataccacaaggacttccagtgtccatt
gaggaactctacttagagagcaatgaaattgaagagattgtggagacctcattcaatcat
acaaaaaatctcaatacagttgtattaaggcacaacaagcttgaagaaagcagaatagac
ccactgacctggatctttcataggaacctggaatcaatagatctttcctacaacaaatta
taccaagtcccatcatatttaccaaagtctttaatgcatctagtgttagtaggcaaccag
atagaaaggattccaggttatgtttttgcacaccttaatccaggactggaatatctctac
ctttccttcaacaaattagacaacgatggaattgatgctgtttccttccatggggcatac
cactcattaagagagatatttcttgatcacaacgagttacgggatgtgccaactggaata
gaacacatgacagaccttcatattctaagacttaacaacaacaaaatcagatccgtgtct
ccatactgtatctgtagtgctgaagaagaaggtgactccagcttagaggagcttcatctt
gaaaacaacttcatcaatacaagggaaatttccccatatgcattcttctgccttcgatcg
tactccagtgtcatccttaaaccccagaaagtcaagtaa
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