Xenopus laevis (African clawed frog): 397796
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Entry
397796 CDS
T01010
Symbol
ubqln4.S, a1u, c1orf6, cip75, ubin, xdrp1
Name
(RefSeq) ubiquilin 4 S homeolog
KO
K04523
ubiquilin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
397796 (ubqln4.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
397796 (ubqln4.S)
03051 Proteasome [BR:
xla03051
]
397796 (ubqln4.S)
Membrane trafficking [BR:
xla04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
397796 (ubqln4.S)
Proteasome [BR:
xla03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
397796 (ubqln4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
CUE
HOIP-UBA
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
397796
NCBI-ProteinID:
NP_001081365
Xenbase:
XB-GENE-17341989
UniProt:
Q9PVN8
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Position
8S:complement(98478301..98493616)
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AA seq
585 aa
AA seq
DB search
MAESGADGAASGTTGPAPGKGLIRVTVKTPKDKEEISRRFKAKRDQLVLIFAGKILKDGD
TLNQHGIKDGLTVHLVIKTAQKSQDPSAVSSASVAASSDSPSQTGNATSQTPSTGNGSSE
GTGETNRATAPGTAANGSPAAPDLLSGFGGLSGLGNLGMGSSNFMELQQQMQRQLMSNPE
MLSQIMENPLVQNMMSNPDLMRQMIIANPQMQQLMERNPEISHMLNNPELMRQTMELARN
PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSALAGGSE
GSASQPLRTENREPLPNPWSPASPSSQNQTSNSESNTGSTTSQSVPTVSNPLGINAASLG
TGTYNSPEMQGLLQQITENPQLIQSMISAPYTRSMMQAMAQNPEFTAQMMGNIPIFSGNP
QLQEQLRHQLPVFLQQMQNPESMSVMSNPRAMQALLQVQQGLQTLQTEAPGLLSSLGSVG
IPGVPPTSGGSTAPENPASSSTPSSASPSGGSSSNNPQQQMMQQMIQLLAGGNSQVQNPE
VRFQSQLDQLNAMGFINREANVQALIATGGDINAAIERLLGSQPS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcggcgctgatggtgcggcctctggtactaccgggccggctccgggtaaa
ggtcttattcgtgtcaccgtcaaaacgcccaaagacaaggaagagatctccaggcggttc
aaagcgaaacgggatcagctggttctgatctttgccgggaaaattctgaaagacggggac
acgctgaaccagcacggcatcaaagatggcctcaccgtacatttagtcatcaaaacagca
cagaaatcccaggacccatcagcggtttcctctgcttctgttgcggcttcttccgactcc
ccctcgcagacagggaacgctacgtcccagacaccctctactggcaatggctcctccgag
gggaccggtgaaaccaacagagcaacggctcccggcactgctgcaaatggatctcccgct
gccccagacctgctgtccggatttgggggtttgtcaggattgggcaatctgggcatggga
tcttccaacttcatggaactgcagcagcagatgcagagacagctcatgtccaaccccgag
atgctgtcccaaattatggagaaccccctggtgcaaaacatgatgtctaaccccgatctg
atgaggcagatgatcatagccaatccgcagatgcagcagctcatggaaaggaacccagag
atcagccatatgttgaacaacccagagctgatgaggcagactatggagttggctcgaaac
cctgccatgatgcaggagatgatgaggaaccaggaccgagccctcagcaacctagaaagc
atccctggtggatacaatgccttgcgccgaatgtacacagacatccaggaaccaatgttt
agtgcagccagagaacagtttggcaataatcctttttccgcattagccggcggctcagag
ggttcagcctcacagccactgcgcacagagaacagggagccgctccccaacccctggagc
ccagcctcgccctcttcccaaaaccagacgtccaacagtgaaagcaacactggctctacc
accagccaaagtgtccccaccgtgtccaaccctcttggcatcaacgctgccagtctggga
acaggcacctataatagcccagaaatgcaaggcctgttgcagcagatcacggaaaacccc
cagttaatacagagtatgatttctgccccctacacgcggagtatgatgcaggccatggcg
cagaacccagaatttactgcacagatgatggggaacattccaatcttctctgggaacccg
cagctacaggaacagcttcgacaccaactgccagtcttcctgcagcagatgcagaaccca
gaatctatgtcagtaatgagtaaccccagggcgatgcaggcgctgctccaggtccaacag
ggacttcagacactgcagactgaggccccgggcttgttatccagcctcggttccgttgga
atccctggggtcccacccacgtctggtggaagtacagcccctgaaaaccccgcctcttcc
tccacaccatcaagtgcctctccatcagggggcagcagcagcaacaatccccagcaacag
atgatgcagcagatgatacaacttttggccgggggtaattctcaggtgcagaaccccgag
gtccgtttccagtctcagctggaccagctcaacgccatggggtttatcaaccgggaagca
aatgtacaggcccttatagctactgggggcgacatcaatgctgccatcgagagactgttg
ggctcccagccctcctaa
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